Pseudarthrobacter oxydans: SMD14_13430
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Entry
SMD14_13430 CDS
T09608
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pok
Pseudarthrobacter oxydans
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pok03400
]
SMD14_13430
Enzymes [BR:
pok01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SMD14_13430
DNA repair and recombination proteins [BR:
pok03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SMD14_13430
Prokaryotic type
SMD14_13430
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WPU08161
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All DBs
Position
2966593..2968026
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AA seq
477 aa
AA seq
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MDSSGVTSIVWLRDDLRLDDNPALVEAAALGLPLTVVFILDEESEGVRPLGGATRWWLHH
SLTSLAAALEATGSRLVLRRGPALEVIRQLAAETNAGHLFWNRRYSLPERTLDAAVKAWC
GENGIEASSYQANLLFEPWTVRTGAGGPYKVFTPFWRACLANGDVRGPLDAPLKLPAPPK
GTGGMPAGDELEGWQLLPSSPDWSGGLAETWEPGEEGAHRRLEDFLDGPARDYGTGRNVP
GVEGTSRLSPHLRFGEVSPFRIWREIRSSFPREVPADVGIFRSELGWREFCWHLLYTNPE
LATRNYRAEFDRFEWQSLGSEELKAWQQGRTGYPFVDAGMRQLWQTGWMHNRVRMAAASF
LVKNLLADWRTGEAWFWDTLVDADAASNPANWQWVAGSGADASPYYRIFNPVTQSKKFDA
AGNYLRRYIPELAGLDGKGIHEPWKAGGDLRGYPAPLVDLPESRERALEAYQRLKDG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggactcctccggtgtgacctcgatcgtctggcttcgcgacgaccttcggctggacgac
aatccggccctggtggaagcggctgcgctgggcctgcccctgacggtcgtcttcatcctc
gacgaggagtccgagggcgtccggccactcggcggggccacccggtggtggttgcatcac
tccctcacctccctggcggcggcgctcgaggccaccggctcccgactggtcctccgccgc
ggccccgcgctggaggtaatccggcaactcgccgccgagaccaacgcaggccacctgttc
tggaaccgccgctacagcctgccggaacgcacacttgacgccgccgtcaaggcgtggtgc
ggagaaaacggtattgaagcctccagctaccaggcgaacctcctgtttgaaccatggacg
gtccgcaccggtgccggcggcccctacaaagtgttcacaccgttctggcgggcctgcctc
gcgaacggtgatgtgcgcggccccctcgacgctccgctgaagttgccggcgccgcccaag
ggaacaggtggcatgccggccggggacgagcttgagggctggcagctcctgccctcctcc
cccgactggagcggcgggctggccgaaacctgggagcctggggaagaaggtgcccaccgg
cggctggaggatttcctggacggtcctgcacgggactacggcaccggccgcaatgtgccg
ggggtggaaggaacaagccgcctgtctccgcacctgcgcttcggcgaagtcagtcctttc
aggatctggcgggaaatccgcagcagctttccgcgggaggtgccggccgacgtcgggatc
ttccgttccgagctcggctggcgcgagttctgctggcacctcctgtacaccaacccggaa
ctggccacccgtaactaccgggcggagtttgaccgctttgagtggcagtccctgggcagc
gaggaactgaaggcctggcagcagggccgcaccggatatccgttcgttgatgccgggatg
cggcagctctggcagacaggctggatgcacaacagggtgaggatggcggcagcgtccttc
ctggtcaagaacctcctggcggattggcggaccggggaggcctggttctgggacaccctg
gtggacgccgacgccgcgagcaaccccgccaactggcagtgggtggcaggctcaggagcg
gacgcgtccccgtactaccggatcttcaacccggtgacccagagcaagaagttcgacgcc
gccgggaactacctgcgccgctacatccctgagctggcaggactggacggaaaaggcatc
cacgagccgtggaaggccggcggtgacctgcgggggtatcccgctcccctggtggacctc
ccggagtcccgggaacgggcactcgaggcctaccagcggcttaaggacggctga
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