Pseudarthrobacter oxydans: SMD14_13470
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Entry
SMD14_13470 CDS
T09608
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pok
Pseudarthrobacter oxydans
Pathway
pok03420
Nucleotide excision repair
pok03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMD14_13470
03430 Mismatch repair
SMD14_13470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pok03400
]
SMD14_13470
Enzymes [BR:
pok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMD14_13470
DNA repair and recombination proteins [BR:
pok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMD14_13470
MMR (mismatch excision repair)
Other MMR factors
SMD14_13470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
HHH
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
WPU08165
LinkDB
All DBs
Position
complement(2976140..2978275)
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AA seq
711 aa
AA seq
DB search
MTTEHIDGTASLEDRILGGLDAEQREVASTLNGPLCVLAGAGTGKTRAITHRIAYGVHSG
VYSPQRLLAVTFTARAAAEMRSRLRDLGVGNVQARTFHAAALRQLQFFWPQAVGGTLPNL
LDHKAQMLAEAARRLRLSTDRASIRDLASEIEWAKVSMLTPANYLENAQDRGAPGGFDLT
AVARVFQSYEDVKTDRNVIDFEDVLLITVGILQEDEKVAATVREQYRHFVVDEYQDVSPL
QQRLLDLWLGGRDELCVVGDASQTIYSFTGASPKHLLDFKARFPQANVVKLIRDYRSTPQ
VVKLANDLLAGRRSGGPLADAAWATPLQLVAQRPAGPAPQFTECADDEAEAATVAQKIKA
LLDAGTPASEVAVLFRTNGQSEAYEQALAAAGIGYQLRGGERFFARKEVRDAILQLRAAT
RAVAETDSPEPLGQLVRDIVSSLGYTDSAPHSGGALRERWESLAALVALADELVQTRGAR
FGLADFVNELQERSLAQHAPTVQGVTLASLHAAKGLEWDAVFLVGLSEGLMPISFADSPE
SVDEERRLLYVGITRAREHLSLSWSTARTPGGRANRKPSRFLDGLRPDSVATSTTRGKVT
VSRRKAAAPAMCRVCGSMLATGAERKVGRCNSCPPSYEEQTFDALRNWRREVALAAEVPA
FVVFTDATLTAIAEARPASLEELAGLAGVGPSKLERYGEDVLRVLTESTSL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgactacagaacatattgacgggacagcctccctggaggaccgcatccttggcggcctg
gacgcggagcagcgcgaagtcgccagcaccctgaacggcccgctgtgtgtcctggcaggc
gcagggaccggcaagactcgcgccatcacccaccgcatcgcctacggcgtccactccggc
gtctattcgccgcaacggctgcttgcggtgacgttcacggcccgggccgctgccgagatg
cggagccggctgcgggatctcggggtgggcaacgtgcaggcacggacattccacgccgcc
gccctgcgccagctgcagttcttctggccgcaggcggttggcggaacgctgcccaacctc
ctggaccacaaggcacagatgctggccgaggccgcgcggcggctccggctcagcacggac
agggcctccatccgcgatctcgcctccgaaatcgagtgggccaaggtgtcgatgctcacg
ccggccaactacctggaaaatgcccaggacaggggcgccccgggagggttcgacctcacc
gccgtggccagggtcttccagtcgtatgaggacgtgaagacggaccgcaacgtcattgac
ttcgaggacgtcctgctgatcacggtgggaattctccaggaggacgagaaggtcgctgcc
accgtccgcgagcagtaccggcactttgtggtggacgagtaccaggacgtctccccgctg
cagcagcggctcctggacctctggctcggcggccgggacgaactctgcgtcgtcggtgac
gccagccagaccatctattcgtttacgggggcttcccctaagcacctcctggatttcaaa
gcccgcttcccgcaggccaacgtggtcaaactgatccgggactaccgttcgacgccccag
gtggtcaagctcgccaacgacctcctggcaggccggcggagcggcggtccactggccgac
gccgcctgggcaacaccgctccagctcgtggcccagcggccggcgggcccggcaccccag
ttcaccgagtgcgcggacgatgaagcagaggctgccactgttgcccagaagatcaaggcc
ctgctcgacgccggcacgcccgcaagcgaggtggccgtcctgttccggaccaacggccag
tccgaggcgtacgaacaggccctcgctgcggccggcatcgggtaccagctgcgcggcggc
gagcggttcttcgcccgcaaggaggtccgggacgccatcctgcagcttcgggccgcaacc
cgggccgtcgcggagacggattcccccgagccgctggggcaactggtccgggacattgtc
tcgtccctcggctacacggactccgccccccacagcggcggcgcactgcgggagcggtgg
gaatcgctggcggccctggtggcgcttgccgacgaactggtccaaacccggggtgcccgg
tttggcctggccgacttcgtcaacgaactccaggaacgttccctcgcccagcacgccccc
acggtccagggcgtgactcttgcctcgctgcacgcggccaagggcctcgaatgggatgcg
gtgttcctggtgggcctcagcgaggggctgatgcccatctccttcgctgactcgccggaa
tcggtggacgaggaacgcaggctcctttacgtgggaatcacccgtgcccgggagcacctg
tcgctgtcctggtccactgcccggaccccgggcggacgggcaaacaggaaaccgtccagg
ttccttgacgggctgcgcccggattcggtggcgacttcaaccacccgggggaaggtcacg
gtgtcccgccggaaggccgccgctcctgccatgtgccgggtctgtggaagcatgctcgcc
accggcgcggaacgcaaggtgggccggtgcaattcctgtccgccgagttatgaggagcag
actttcgatgccctgcggaactggcgccgcgaagttgccctcgccgccgaggtgccggcg
ttcgtcgtgttcaccgatgccacgctcacggccatcgccgaggcgcgcccagcctcgctc
gaagagctggccggactggcaggagtgggcccgtccaagctggaacggtacggggaggac
gttctgcgcgtcctcacggaaagcacttccctgtga
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