Pseudarthrobacter oxydans: SMD14_13490
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Entry
SMD14_13490 CDS
T09608
Name
(GenBank) ATP-dependent DNA helicase
Organism
pok
Pseudarthrobacter oxydans
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD-helicase
UvrD_C
AAA_19
AAA_11
AAA_30
AAA_22
DEAD
AAA_16
AAA_25
ResIII
Motif
Other DBs
NCBI-ProteinID:
WPU08168
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All DBs
Position
complement(2984324..2987692)
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AA seq
1122 aa
AA seq
DB search
MTVTMPLTGPLDESRDGSADGPARHSGEPAGPGDGRTPPRQAGAAGTGLRLLPPRQVHVV
APLLSADQQAAVDVPQGTGPVLLPGAPGTGKTTVLVEAAVSRVTRDGVDPERILILAPSR
LAADAMRDRFTARLNRSLSTTPARTWASYAFDVIRRAKAEGILPLSRPPRLLSGPEQDLI
IKELLEGHRLPGLELPWPADIEGALETRGFRQEVRQLFDRIIESGRTPGDLVGLGHECRR
PDWIAAASLYAEYRDVLDLRMPEAFDPAGIITAVRQIFQDSPGFLAAERDRLQVILVDDI
QEANPAVFELLADIAGGKDCYVAFSPDTVVQGFRGARPDLVAELPGLLSPGAPVAERPLR
YAHRQAPAVAEAWLGVAGRISQRAGGQLARRLDQPDPDQPDDARPQGAVEAHLVPSAVHE
LRYVAQRILDQHINHGRDLAELAVIVRNGAQVSEFQRYLSGQGIPVRVPVAESAVRDEVA
VRPLLDAFAIALDPALLTPEAAVSLLTSRIGGATSIELRRLRQSLRRDEILGGGGRTSDA
LLVEALLEPGALETLGIEGRAARRGARMIQAGRHAAAQPGANAESVLWALWDATGLAGSW
TETALAGGPHGARADRDLDAMMALFHTAERYVDQMPGAGPEQFLEYLLNQELPMDTLAAR
AQVDDAVELLTPASAAGREWPVVIVAGLQEGVWPNTRLRGELLGSTLYSDAVEHGPGYAL
QRDPLSRLRDIRYDELRSFSTAVSRARELLVCTAVSSEDDQPSSFLDYVVPLEPGQEGRP
FTAVQRPMALRALVAELRQHAQLDGGDAPQADEAARVLARLAKADPPVPGAHPQSWWGLL
PLTSAAAVVPPGGTVFVSPSKVETVQKSPLDWFIQAAGGEAATDFARSLGTLVHAIAQDL
PDASGSEYVAELVRRWPALGMKDNWEGRLDFQRAESMVRKLAQYVLLMRSEGRSLLGVEQ
DFDVALGKVPVDDAPARDAVLRGQVDRLEVDAEGRLVIVDLKTGKRQPGKGELSRHPQLG
AYQAAVLAGGFRDRPDSPAAPLPGGAVLAQLGTGAKNPAIQHQDAIDPQENWAMDMVKDA
AAVMGGTTFEARHDPSKGSHGGHGCRLPEVCPLCVRGRQVTE
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
gtgacagtaaccatgcccctcaccggcccccttgacgaatcccgggatggctccgcggac
ggccccgcgcgtcattccggtgaacccgccggcccgggagacggccgtacgcccccgcgg
caggccggagctgcaggaaccggcctgcggctgctgccgccccgccaggtgcatgtcgtg
gcgcccctgctctccgccgaccagcaggcggccgtcgacgtcccccagggaacagggccg
gttttgctgcccggcgctccgggaactggcaagaccaccgtcctggtggaggccgccgtc
agcagggtcacccgtgacggcgtggatcccgagcggatactgatcctggcgcccagccgc
ctggctgccgatgccatgcgggaccgcttcacggcccggctgaacaggagcctgagcacc
acccccgcgcggacctgggcctcctacgcctttgatgtgatccggcgtgccaaggcggaa
gggatccttcccctgtcccggccgcccaggctcctctcaggcccggagcaggacctcatc
atcaaggagctccttgaaggccatcgcctgcccggcctggagcttccctggcccgccgac
attgaaggtgccctggaaacccggggcttccggcaggaagtccggcagctgttcgaccgc
atcatcgagtcgggccgtacccccggcgacctggtagggctgggacacgagtgccgcagg
cctgactggatcgccgctgcgtccctgtacgccgagtaccgggacgtcctggacctgcgg
atgcctgaggctttcgatccggccggcatcatcacggcagtacggcagattttccaggac
tctcccggcttcctggcggcggaacgggaccggctgcaggtgatcctggtggacgacatc
caggaagccaaccccgcagtctttgagctcttggccgacatcgccggcgggaaggactgc
tacgtggcgttttcaccggacactgtggtgcagggcttccgcggtgccaggcccgacctc
gtggcagaactgcccgggctgctgtcgcccggtgcacccgtggcggagcgtccactgcgg
tacgcccaccggcaagcgcccgcggtggccgaagcctggcttggagtggccgggcggatt
tcacagcgcgctggcgggcaactggcccggcggcttgaccaacccgaccctgatcaaccc
gacgacgccaggccccaaggggcagtggaagcacaccttgttccgtccgccgtgcacgaa
ctgcgctacgttgcccagcgcatcctggaccagcacatcaaccacgggcgcgaccttgcc
gaactcgcggtgatcgtgcgcaacggcgcccaggtgagcgagttccagcgttacctgtcg
ggccaggggattcctgtgcgggtcccggtggcggagtccgcggtccgggacgaagtggca
gtccgcccgctgcttgatgccttcgcgattgcactggatccagcgctgctgaccccggag
gccgcagtatccctcctgacctcccggatcggcggtgccacatcgatcgagctccgccgg
ctgcggcagtcgctgaggagggacgagatcctgggcggcggaggccggaccagcgacgcc
ctgctggttgaagcattgctggaacccggcgcactggaaacgctcggcatcgaaggccgt
gccgcacgccgtggcgcacgcatgatccaggcgggccgccacgccgctgcgcaacctggc
gccaacgccgaatcagtgctgtgggcactctgggatgccaccggactcgccggttcctgg
acggaaaccgcccttgccggcggtccgcacggcgcgcgtgcggaccgggacctggatgcc
atgatggccctcttccacaccgcggagcgttacgtggaccagatgcccggggccggcccc
gagcagttcctcgagtatctcctgaaccaggagcttcccatggacaccctcgctgcccgt
gcccaggtggacgacgccgtggaactgttgactccagccagtgcggccgggcgggaatgg
ccggtggtgatagtggcgggcctccaggaaggtgtgtggcccaatacccggctccgcggc
gaacttctgggaagtacgctgtacagcgacgcggtggaacacgggccggggtacgccctg
cagcgtgatcccctgagccggctccgcgacatccggtatgacgaactgcgaagcttttcc
actgcggtctcccgcgcccgcgaactgctcgtatgcacggctgtttcctccgaggatgac
cagccgtcctccttcctggactacgttgtgcccctggaaccgggccaggagggccgtccg
ttcacggcagtgcagcggcccatggcgctgcgggcccttgttgccgaactccggcagcac
gcccagctggacggcggggacgctccgcaggcggatgaggcggccagggtcctcgcccgg
ctggcaaaggctgacccgccggtgcccggcgcgcatccgcagagctggtggggccttctt
ccgctgacgtcggcggcagcggtggttccgcctggcggtaccgtctttgtctcaccgtca
aaagtcgagaccgtgcagaaatccccgcttgactggtttatccaggccgcgggaggcgaa
gctgccactgacttcgcccgcagccttggcaccctggtccacgccattgcccaggacctg
ccggatgcgtccggcagtgagtatgtcgcagaactggtccggcgctggcccgcactggga
atgaaggacaactgggagggcaggctggacttccagcgtgccgagtccatggtgcgcaag
ctggcacagtatgtactcctcatgcgaagcgaaggccgaagcctgctcggagtggaacag
gatttcgacgtcgccctcggaaaggttcctgtcgatgatgctcccgcccgggacgctgtc
ctgcgcggccaggtggacaggcttgaggtggacgccgaaggcaggctggtcatcgtggac
ctcaaaaccggaaaacgccagcccggtaagggggaactgtcacggcatccccagctcggc
gcctaccaggccgcggtgctcgccgggggcttccgggaccgaccggacagccccgccgct
ccgctccctggcggtgccgtcctggcccagctcggcaccggggcaaagaatcccgccatc
cagcatcaggacgccatagaccctcaggagaactgggcgatggacatggtgaaggatgca
gccgccgtaatgggaggcaccacgttcgaagcacggcacgatccctcgaagggaagccat
ggcggccacggctgcaggctccccgaggtgtgtccgctgtgcgtgcgcggaaggcaagtg
accgaatga
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