Pseudarthrobacter oxydans: SMD14_17405
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Entry
SMD14_17405 CDS
T09608
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pok
Pseudarthrobacter oxydans
Pathway
pok00260
Glycine, serine and threonine metabolism
pok00460
Cyanoamino acid metabolism
pok00630
Glyoxylate and dicarboxylate metabolism
pok00670
One carbon pool by folate
pok00680
Methane metabolism
pok01100
Metabolic pathways
pok01110
Biosynthesis of secondary metabolites
pok01120
Microbial metabolism in diverse environments
pok01200
Carbon metabolism
pok01230
Biosynthesis of amino acids
pok01240
Biosynthesis of cofactors
pok04981
Folate transport and metabolism
Module
pok_M00140
C1-unit interconversion, prokaryotes
pok_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SMD14_17405 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SMD14_17405 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SMD14_17405 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SMD14_17405 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SMD14_17405 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SMD14_17405 (glyA)
Enzymes [BR:
pok01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SMD14_17405 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
TetR_C_45
Motif
Other DBs
NCBI-ProteinID:
WPU08896
LinkDB
All DBs
Position
complement(3805340..3806674)
Genome browser
AA seq
444 aa
AA seq
DB search
MSSAAAGTGTVTAFEQVVSPSLDADLSTLDPEIAAKIDDELTRQRDGLEMIASENHTAVA
VMQAQGSVLTNKYAEGYPGKRYYGGCEHVDVIEQLAIDRIKALFGAGFANVQPHSGAQAN
ASVMHALIKPGDTIMGLNLAHGGHLTHGMKINFSGKLYNVVPYGVREDTHTVDMAEVERL
AQETRPALIVAGWSAYARQLDFAEFRRIADSVGAYLMVDMAHFAGLVAAGLHPSPVPHAH
VTTSTTHKTLAGPRGGIILTNDADTAKKINSAVFPGQQGGPLEHVIAGKAVAFKIAASAE
FKERQQRVLAGARILAERLVQPDVTAKGISVVSGGTDVHLVLVDLRNCELDGQQAEDRLA
AIDITVNRNAVPFDPRPPMVTSGLRIGTPALATRGFGEDAFREVADIIAEALTADADADL
SGLRHRVDVLASAHPLYPGVAPLS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcgcggcagcaggcaccggtacagtgacggccttcgagcaggtggtttcgccg
agtctcgacgcggacctctccaccctggacccggagatcgccgcgaagatcgacgacgaa
ctcacccgccagcgcgacggcctggagatgatcgcctccgagaaccacaccgccgtggcc
gtcatgcaggcgcagggctcggtgctgaccaacaagtacgccgagggctacccgggcaag
cgctactacggcggctgcgaacacgtggacgtcatcgaacagctcgccatcgaccggatc
aaggcgctcttcggcgcggggttcgccaacgtgcagccgcactccggcgcccaggccaat
gcctcggtgatgcacgcgctgatcaagccgggcgacaccatcatgggcctgaaccttgcc
cacggcgggcacctcacccacggcatgaagatcaacttctccggcaagctctacaacgtg
gtcccctacggcgtccgcgaggacacccacacagtggacatggccgaggtggagcgcctg
gcccaggagaccaggccggcgctgatcgtggccggctggtccgcctacgcccggcagctg
gacttcgccgagttccgccgcatcgctgattccgtgggcgcctacctcatggtggacatg
gcgcacttcgccgggctcgtggccgccggcctgcacccgtcgccggtgccccacgcgcac
gtgaccacgtccaccacgcacaagaccctcgccggtccgcgcggcggcatcatcctgacg
aacgacgccgacaccgccaagaagatcaactcggctgtgttccccggacagcagggcgga
ccgctggagcacgtgattgcgggcaaggccgtggcgttcaagatcgccgcgtccgccgag
ttcaaggagcgccagcagcgcgtccttgccggcgcccggatcctcgccgagcgcctggtc
cagccggacgtcacggccaagggcatcagcgtggtctccggcggcaccgatgtgcacctg
gtcctggtcgacctgcgcaactgcgagctcgacgggcagcaggccgaggaccgcctcgcg
gccatcgacatcacggtcaaccgcaacgccgtccccttcgacccgcggccaccgatggtg
acctccggcctccggatcggcacgcctgcgctggcaacgcgcgggttcggcgaggacgcc
ttccgcgaggtcgcggacatcatcgccgaggcattgacggccgacgccgacgccgacctt
tcggggctgcgtcaccgcgtcgacgtcctggcttcggcgcacccgctctacccgggcgtc
gcaccactgtcctga
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