Entry |
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Name |
(GenBank) DNA gyrase subunit B
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KO |
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Organism |
pol Polaromonas sp. JS666
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Brite |
KEGG Orthology (KO) [BR:pol00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:pol03032]
Bpro_0003
03400 DNA repair and recombination proteins [BR:pol03400]
Bpro_0003
Enzymes [BR:pol01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Bpro_0003
DNA replication proteins [BR:pol03032]
Prokaryotic type
DNA Topoisomerases
Bpro_0003
DNA repair and recombination proteins [BR:pol03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Bpro_0003
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2944..5568
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AA seq |
874 aa
MTEENNVNGADQVHVTDGTAGEESSNFQPKIDTNQAGASEAYGEGSIQILEGLEAVRKRP
GMYIGDTSDGTGLHHLVFEVVDNSIDEALAGHCDDIVVTIHTDNSISVTDNGRGIPTGIK
MDDKHEPKRSAAEIALTELHAGGKFNQNSYKVSGGLHGVGVSCVNALSKMLRLTIRRDGK
VHVMEFSRGFVQNRIIEQINGVDVSPMKVMDHTDKRGTEVHFLPDTEIFKENNDFHYEIL
SKRLRELSFLNNGVRIRLKDERSGKEDDFAGAGGVKGFVEFINKGKTVLHPNVFAAMGDR
QSDQGTNIGVEVAMQWNSGYSEQVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYIDDSEL
AKKAKVEVTGDDMREGLCCVLSVKVPEPKFSSQTKDKLVSSEVRGPVEDIVSRLLHDYLQ
ERPNDAKIIVGKIIEAARAREAARKARDMTRRKGVLDGMGLPGKLADCQEKDPAMCEIYL
VEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKARYEKLLTSNEILTLITALGTGIGKAG
GIGGTPGTDDFNVAKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQP
PLYKVKAGKEEQYLKDTAALDGFLLRIALKDASVQTGADASTVLTGDTLAELARKHQLAE
SVIARLRGFMDAEALRAIADGVSLNLDTVADAEASAVTLQVKLRELNTTGAPADVAGEFD
TRTDKPILRISRRHHGNVKSSVITQDFVHGADYATLADAAATFRGLISEGAKVMRGEGER
QKEEKVSDFRQAMAWLIGQAENATARQRYKGLGEMNPAQLWETTMDPQVRRLLRVQIDDA
IEADHVFTMLMGDEVEPRREFIEQNALRAANIDV |
NT seq |
2625 nt +upstreamnt +downstreamnt
atgactgaagaaaacaatgtgaacggggccgatcaggtgcacgtaactgacggtactgcg
ggcgaggaaagctccaatttccagcccaaaatcgacaccaaccaggccggcgcttcagaa
gcctacggcgaaggctcgatccagatcctggaaggcctggaagccgtgcgcaagcgcccc
ggcatgtacattggcgacacttcagacggcaccggcttgcaccacctggtgttcgaggtg
gtcgacaactcgattgacgaagcactggccggccactgcgacgacatcgtcgtcaccatc
cacaccgacaactccatcagcgtgaccgacaacggccgcggcattccgaccggcatcaag
atggacgataagcatgagcccaaacgctcggccgccgagattgccctgaccgagctgcat
gccggcggcaagttcaaccagaacagctacaaggtctcgggtggcctgcacggcgtgggc
gtgagttgcgtgaatgcgctgtcaaaaatgctgcgcctcaccattcgccgcgacggcaag
gtgcatgtcatggagttctcgcgcggctttgttcaaaaccgcatcatcgagcagatcaac
ggcgtggatgtctcgccgatgaaggtgatggaccacaccgacaagcgcggcaccgaagtc
cactttttgcccgacactgaaatcttcaaagagaacaacgatttccattacgagatcttg
agcaagcgcctgcgcgagctgagttttttgaacaacggcgtgcgcattcgcctgaaagac
gagcgcagcggcaaggaagacgactttgccggcgccggcggcgtgaaaggctttgttgaa
ttcatcaacaagggcaagacggtgctgcaccccaacgtgtttgccgccatgggcgaccgc
cagagcgaccagggcaccaacatcggcgtggaagtcgccatgcagtggaacagcggctac
agcgaacaggtgctgtgtttcaccaacaacattccgcagcgcgacggcggcacccacctg
accggcctgcgcgccgcgatgacgcgcgtcatcaacaaatacatcgacgacagcgagctg
gccaaaaaagccaaggtggaagtcacgggcgacgacatgcgcgaaggcctgtgctgcgtg
ctgagcgtgaaggtgcccgagcccaagttctccagccagaccaaggacaagctggtgagc
agcgaggtgcgcggcccggtcgaagacattgtgagccgcctgttgcacgactacctgcag
gagcgcccgaacgacgccaagatcatcgtcggcaagatcattgaggccgcccgcgctcgc
gaagccgcgcgcaaggcgcgcgacatgacgcgccgcaagggcgtgctcgacggcatgggc
ctgcccggcaagctggccgactgccaggaaaaagaccccgccatgtgcgagatctacctg
gtcgagggtgactccgccggtggctccgccaagcagggccgcgaccgtaaattccaggcc
atcctgccgctgcgcggcaagatcctgaacgttgaaaaagcccgctacgaaaagctgctg
accagcaacgagattttgacgctgatcaccgcgctgggcaccggcatcggcaaggccggc
ggcattggcggcacgcccggcactgacgacttcaacgttgccaagctgcgctaccaccgc
atcatcatcatgaccgacgccgacgtggacggcgcgcacatccgcacgctgttgctgacc
ttcttttaccgccagatgcccgagctggtcgagcgcggccacatctacatcgcgcagcca
ccgctgtacaaggtcaaggccggcaaggaagagcagtacctcaaggacaccgccgcactg
gacggctttttgctgcgcattgcgctcaaggatgcgagcgtgcagaccggcgccgacgca
agcaccgtgcttaccggcgacacgctggccgagctggcccgcaagcaccagctggccgag
tcagtgattgcccgcctgcgcggcttcatggacgcggaagccctgcgcgccattgccgac
ggcgtgagcctgaacctggacaccgtggccgatgcggaagcctccgccgtgacgctgcag
gtcaagctgcgcgaactgaacaccacgggcgcgccggccgacgtggccggcgagtttgac
acccgcaccgacaaacccattctgcgcatcagccgccgccaccacggcaacgtgaaaagc
agcgtgatcacgcaggactttgtgcacggcgccgactacgccaccctggccgatgccgcc
gccaccttccgcggcctcatcagcgaaggcgccaaggtcatgcgcggcgaaggcgagcgc
cagaaggaagaaaaagtcagcgacttccgccaggccatggcctggctgatcggccaggcc
gaaaacgccaccgcccgtcagcgctacaaaggcctgggcgagatgaacccggcccagcta
tgggagacgacgatggacccacaggtgcgccgtttgctacgcgtgcagattgacgacgcc
attgaagccgaccatgtgttcaccatgctgatgggtgatgaggtcgagccgcgtcgggag
tttattgagcagaatgcgttgcgggcggcgaatattgatgtctaa |