Polaromonas sp. JS666: Bpro_0501
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Entry
Bpro_0501 CDS
T00343
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pol
Polaromonas sp. JS666
Pathway
pol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bpro_0501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pol03021
]
Bpro_0501
03400 DNA repair and recombination proteins [BR:
pol03400
]
Bpro_0501
Enzymes [BR:
pol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bpro_0501
Transcription machinery [BR:
pol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bpro_0501
DNA repair and recombination proteins [BR:
pol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bpro_0501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF211
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ABE42465
UniProt:
Q12G77
LinkDB
All DBs
Position
510628..511617
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AA seq
329 aa
AA seq
DB search
MQTNLLKPKTINVEQLGANRAKVTLEPFERGYGHTLGNALRRVLLSSMVGHAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGPVTAADIQTPHDVEI
INPEHVIVNLSHGGKIDMQIKVENGRGYVPGTMRRYGDESPKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVLEIETNGAVTAEDAVRASAKILVEQLAVFAQLEGNELAAFDA
PVQRSSQQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSL
NEIKEVLASRGLTLGMRLESWPPAGLDKR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccaatttgttgaaacctaaaaccatcaatgtggagcagcttggcgcgaatcgc
gccaaggtgactctggagccattcgagcgtggctacggccacacgctgggcaatgccctg
cgccgtgtgttgttgtcctccatggttggccatgccgccactgaagtgaccattgccggc
gttctgcatgagtactcgtccatcgacggcgtgcaggaagatgtcgtcaatatcctgttg
aacctcaaaggtgtggtgttcaagctccacaaccgcgacgaagtgaccctcagcctgcgc
aaagacggcgaaggtcctgtgaccgcggccgatatccagacgccgcacgatgtggaaatc
atcaaccctgaacacgtgatcgtgaatctgtcgcacggcggcaagatcgacatgcagatc
aaggttgagaatggccgtggctatgtgccgggcaccatgcgtcgctatggcgatgagtcg
ccaaaatccatcggccgcattgtgctggacgcttcgttttccccggtcaagcgcgtgagc
tacaccgtcgaaagcgcccgcgttgagcagcgcacggacctggacaagctggtcctcgaa
attgaaaccaatggtgcagtgaccgctgaggatgctgtccgcgcatcggcgaagattctc
gttgagcagctggctgtgttcgctcagctggaaggcaatgaactggcggcatttgatgca
ccggtgcagcgcagctcgcagcagtttgatcccatcctgttgcgccctgtcgacgagctt
gagctcacggtgcgttcggcaaactgcctgaaagcagaaaacatttactacattggcgat
ctgattcagcgcactgaaaatgagctgctcaagactcccaatctcggacggaaatctctt
aacgagatcaaggaagtgctggcttcccgcggcttgactctgggcatgcgccttgagagc
tggccacctgcaggcctggacaaacgttaa
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