Polaromonas sp. JS666: Bpro_0604
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Entry
Bpro_0604 CDS
T00343
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pol
Polaromonas sp. JS666
Pathway
pol00061
Fatty acid biosynthesis
pol00071
Fatty acid degradation
pol01100
Metabolic pathways
pol01212
Fatty acid metabolism
pol02024
Quorum sensing
pol04146
Peroxisome
Module
pol_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pol00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Bpro_0604
00071 Fatty acid degradation
Bpro_0604
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Bpro_0604
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bpro_0604
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pol01004
]
Bpro_0604
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pol04147
]
Bpro_0604
Enzymes [BR:
pol01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Bpro_0604
Lipid biosynthesis proteins [BR:
pol01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Bpro_0604
Exosome [BR:
pol04147
]
Exosomal proteins
Exosomal proteins of breast milk
Bpro_0604
Exosomal proteins of breast cancer cells
Bpro_0604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
LPD22
DUF2464
Motif
Other DBs
NCBI-ProteinID:
ABE42564
UniProt:
Q12FX8
LinkDB
All DBs
Position
complement(610744..612690)
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AA seq
648 aa
AA seq
DB search
MQTTFPRLLLKHAAERPGAAAMREKEYGIWQAHSWAGMAELVEHIACGLHEAGLGRGEHM
ALIGANRPRLYATMLAAQSLGAIPIPLYQDAVGAECVFPITNADVRFAMVEDQEQVDKLL
EIRDRCPDLAHIIFDDPRGLRNYEEPGLTSLDRLIESGQALAVSQPGWFRMEVDKASPDD
VAAMFFTSGTTGNPKGVVHTHATLLDRAQAGAEFDKLTSAEEVLAYLPPAWIGQNIFSYA
QWLACGYVVNCPESASTVMIDLKEVGPTYYFAPPRVFEGMLTTVMIRMEDAGRLKRGMFN
YFMGVARQVGPALMDGKPVNFIQTLLYGLGNLMVYGPLRNNLGFSRVRVAYTAGEAIGPD
LFTFYRSIGINLKQLYGSTETAVFVCLQPDNEARADTVGVPIQGVQIRVADNGEVLVKSA
GLLKEYYKNPAATAEVLTADGWYHTSDAGFLNASGHLKIIDRVKDVGRIKGGANDGALFA
PKYVENKLKFFPHIKEVVAYGDGREKVCVMINIDFDAVGNWAERRNLPYAGYTDLAQKPE
VYQLIKECVEKVNADLSVDALLAGSQISRFLILHKELDADDGELTRTNKVRRGFIAEKYQ
PLVDALYGGKTEQFIETVVKFEDGRSGSVSATLKISDTQTFAPVKAAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccacgttcccacgattgctgctcaaacatgctgccgagcgtccgggcgccgcg
gccatgcgcgagaaagaatatggcatctggcaggcgcacagctgggccggcatggccgag
ctggtggaacacattgcttgcggcctgcacgaggccggcctggggcgtggcgaacacatg
gcgctgatcggtgccaaccggccgcgcctgtatgccaccatgctggccgcgcagtcgctg
ggggcgattcccattccgctgtaccaggatgccgtgggcgccgaatgcgtcttccccatc
accaatgccgacgtacgcttcgccatggtggaagaccaggagcaggtcgacaagctgctg
gaaatccgtgaccgctgcccggacctggcccacatcatttttgacgacccgcgcggcctg
cgcaattacgaagagcccggactcacatccctggaccggctgattgagtccggccaggcg
ctggcggtgagccagcctggctggttccgcatggaagtcgacaaggcctcccccgacgac
gtggcggcgatgttctttacctcgggcaccaccggcaatcccaagggcgtggtgcacacg
cacgcgaccttgctggaccgtgcgcaggccggcgcagaatttgacaagctcacgagcgcc
gaagaagtgctggcctacctgccgccggcgtggattggccagaacatcttcagctacgcg
cagtggctggcctgcggctatgtggtgaactgccccgagagtgccagcacggtgatgatt
gacctcaaggaggtcggaccgacctattactttgcgccaccgcgggtgtttgaaggcatg
ctcaccacggtcatgatccgcatggaggacgccgggcgcctcaagcgcggcatgttcaat
tacttcatgggggtggctcgccaagtgggtcccgccctcatggacggcaagccggtcaat
ttcatccagaccctgctttatggcctgggcaacctgatggtctacgggcccctgcgcaac
aacctgggcttttcgcgcgtgcgggtggcctacaccgccggcgaagccattggcccggac
ctcttcactttttaccgttccatcggcatcaacctcaagcagctgtatggctccacggaa
accgccgtgttcgtctgcctgcagcccgacaacgaggcgcgggccgacacggtcggcgtg
ccgattcaaggcgtgcagatccgggtggccgacaacggcgaggtcctggtcaagtcggcc
ggcctgctcaaggagtactacaaaaatccggcggccacggccgaggtgctgaccgccgac
ggctggtaccacaccagcgacgccgggtttctgaatgccagcggtcatctcaagatcatt
gaccgggtgaaggacgtgggccgtatcaagggtggcgccaatgacggcgccctgtttgcg
ccgaaatacgtggagaacaagctcaagtttttcccgcacatcaaggaagtcgtggcctac
ggcgacggccgtgaaaaggtctgcgtgatgatcaacatcgacttcgacgcggtgggcaac
tgggccgagcggcgcaacctgccttatgcgggctacaccgacctggcgcaaaagccggag
gtctaccagctcatcaaggagtgcgtcgagaaggtcaatgccgacctcagcgtcgatgcg
ctgctggccggctcgcagatcagccgcttcctgatactgcacaaggaactcgacgccgat
gacggcgagctgacacggaccaacaaggtgcgccgcggcttcatcgccgagaaataccag
ccgctggtcgatgccctgtacggcggcaaaaccgagcagttcattgaaaccgtggtcaag
tttgaagacggccgcagcggcagcgtcagcgccacgctgaagatcagcgacacccaaacc
ttcgcgcccgtgaaggcagcagcatga
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