Polaromonas sp. JS666: Bpro_1706
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Entry
Bpro_1706 CDS
T00343
Name
(GenBank) putative ATP-dependent exoDNAse (exonuclease V), alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pol
Polaromonas sp. JS666
Pathway
pol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Bpro_1706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pol03400
]
Bpro_1706
Enzymes [BR:
pol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Bpro_1706
DNA repair and recombination proteins [BR:
pol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bpro_1706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
HHH_RecD2
Viral_helicase1
AAA_11
Herpes_Helicase
AAA_22
SH3_13
nSTAND3
HerA_C
AAA_16
UvrD-helicase
AAA_28
ORC-CDC6-like
PIF1
AAA
SLFN-g3_helicase
TraI_hel_assoc_N
ATPase_2
AAA_14
TrwB_AAD_bind
AAA_29
Helicase_RecD
T2SSE
TsaE
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
ABE43642
UniProt:
Q12CV0
LinkDB
All DBs
Position
complement(1758797..1760989)
Genome browser
AA seq
730 aa
AA seq
DB search
MNVPSVTVRISAVRSQNPCGRGGAIFTGIEVDDKGWRVDAKTHYVIKASSQLLQAPVECG
QLWRIAGTPEANTIVVNGYRLTEATITAESMEMLRPSGEHIITLLGQGEAFEGIGEVKAR
RLWEHFGDALYDLLDRSDVDRLAEVLPRPMAQKLADAWQQWGNTFTLQWLQSKGFAVALG
RKVLDFFGKDAARKIEDDPYRLLSFAANWATVDALAQDTFGLSPTDPRRLAGSVEEALYA
AFDAGHTCIPELELARRLRVLLQRSDVLGSALAQAESAGRFIRHGERLHAPGPFVMEQGV
AQAIARRAANPDPLLDADSLAELIADYQAQAGISLHQKQVEALELANANPFCVITGGAGT
GKTTVLRGLFRVFEAAGHTIYPMALSGRAAKRIGEATGHGAQTIAGFLKHFNADDAPSNA
VVVIDEASMVDLPSAYRVIRHLPLHYRVVLVGDPNQLPPVGPGLLLHELAHQPQVPVVEL
SQVKRYGGAIAEAAALIRDGEWPDLPADALADIAFLACPPDQINEVVLRLYDQDRSASQI
LCATRNAAAGGMNAINALCQRHTNAHGEGLMHWNLEFDQPQGTGIRVGDPVICLRNDWEI
DLQNGSLGVVLSVEPPVPDIAPERRLGRILWDDGRTRDLTPELLAHLELAYAITIHKAQG
SGFQRVIIPVRQSKLLDRTLLYTAVTRAEQQVILVGDVEAAKTAIRAPRHSDRRHVALGA
LLREQFERMV
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgccaagtgtcaccgtgcgtatcagtgccgtgcgcagccagaacccgtgtggg
cggggtggcgcgatcttcacgggcatcgaggtggacgacaaaggctggcgcgtcgatgcc
aaaacccactacgtcatcaaagcctccagccaattgcttcaggccccggtcgaatgcggg
caactgtggcgcattgccggcacacccgaggccaacaccatagtcgtcaatggctaccgg
ctcaccgaagccaccatcacggccgaatccatggaaatgctgcgcccctcgggcgagcac
atcattacgctgcttggtcagggcgaagccttcgagggcatcggcgaagtcaaggcaagg
cgcttgtgggaacactttggcgatgccttgtacgacctgctcgaccggtcggacgtcgac
cgactcgcagaggtactgcccaggccgatggcgcaaaagctcgcggatgcatggcagcag
tggggcaacacctttaccctgcaatggctgcagtccaaggggtttgccgtagcgctcggg
cgcaaggtactggacttcttcggcaaggacgccgcccgcaagatcgaggacgacccctat
cgcctgctgagctttgccgccaactgggccaccgtggatgccctggcgcaagacaccttc
ggcctcagtcccaccgacccgcgacgtctcgcgggctcggtcgaggaagcgctgtacgcc
gcgtttgacgccggccacacctgcatccccgagcttgagcttgcgcgtcgcctgcgcgtc
ttgttgcagcgaagcgatgtgctggggtcggcactggcgcaagccgaatcagcggggcgg
ttcatccgccatggcgagcgactgcacgcgccgggcccctttgtgatggagcagggcgtg
gcccaagccatcgcccgccgcgccgccaatccagaccccttgctcgacgccgactcactg
gcggaactcatcgccgactatcaggcacaagccggcatcagcttgcatcaaaagcaggtc
gaggcgctggaactggcgaatgccaacccgttctgcgtcattaccgggggcgccggcacc
ggcaagaccaccgtgttgcgcggcttgtttcgcgtctttgaggcggctggccacacgatc
taccccatggcgctctccgggcgtgccgccaagcgcattggcgaggccaccggccatggc
gcccaaaccatcgccggtttcctcaagcacttcaatgcagatgatgcgccttcgaacgcg
gtggtggtgatcgatgaggcctcgatggtggatttgccgtccgcttatcgggtgatccgg
catctgccgctccactaccgtgtggtattggtcggtgacccgaaccaactgccaccggtt
gggccaggcttgctgctgcatgaactggcgcatcaaccccaagttcccgtcgtggaactc
tcgcaggtcaagcgctatggcggggcgattgccgaggccgccgccctgatccgcgacggc
gagtggcccgatttgcccgccgacgctctcgccgacattgccttcctggcatgtccaccg
gatcagatcaacgaagtcgtgctgcgtctgtacgaccaggatcgcagtgccagtcagatt
ctgtgcgccacgcgcaatgccgcagccggtggcatgaatgccatcaacgcgctgtgccag
cgccacaccaacgcccacggtgaagggctgatgcactggaacctggaattcgaccagccg
caaggcactggtatacgcgtgggcgatcctgtcatctgtctgcgcaatgactgggagatc
gatttgcagaacggctcactcggcgtcgtgctgtccgtggagccacccgtgccggacatt
gcgccggagcgccgccttgggcgcatcctgtgggatgacggacgcacgcgtgacctgacc
cctgagttgctggcgcatctggaactggcctacgccatcaccattcacaaggcgcagggc
agcggctttcagcgggtcatcattcctgtgcgccagagcaagctgctggatcgcacgctg
ctgtacaccgccgtgacgcgggcagagcaacaggtgattctggtcggcgacgtggaagcg
gccaaaacagccatacgagcgccgcgccattcggatcgccggcatgtcgcgttgggcgcg
ttgctgcgtgagcagttcgagaggatggtctga
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