Polaromonas sp. JS666: Bpro_2428
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Entry
Bpro_2428 CDS
T00343
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pol
Polaromonas sp. JS666
Brite
KEGG Orthology (KO) [BR:
pol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pol03016
]
Bpro_2428
Enzymes [BR:
pol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Bpro_2428
Transfer RNA biogenesis [BR:
pol03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Bpro_2428
Prokaryotic type
Bpro_2428
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ABE44347
UniProt:
Q12AU5
LinkDB
All DBs
Position
2530305..2531318
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AA seq
337 aa
AA seq
DB search
MTQTSTHRQKIQRRPVHGVLLLDKPLGLSSNQALQKAKWLLRADKAGHTGTLDPLATGVL
PLCFGAATKFSQIQLDADKTYEAVLLLGRKTTTADAEGDVIETRPVPEITPELLATLTRR
FTGPLAQIPPMYSALKKDGKALYEYARKGEDVEREARHITIYKLDMALTHDERAPAAIKI
TVTCSKGTYIRTLGEDIGEAIGCGAHLGSLRRLETGGYVASQCVGLPALEAMSEQQREAC
LLPVQSLVANYPVVTLDADNAGRFLSGLRRRGSPGQWGPDAVLVQVYGSDPAAFLGSAHV
MADELIPGRLLSPIEIQDMLAPRPPVISNPAASAATA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacctctactcatcgccagaagattcagcgacgtcccgtgcacggcgtgctg
ctgctcgacaagccgctgggcctgtcgagcaaccaggcgctgcaaaaagccaaatggctg
ttgcgcgccgacaaggccgggcataccggtacgctggatccgctggccactggcgtgctg
ccgctgtgctttggggcggcgaccaaattcagccagatccagttggacgccgacaagacg
tatgaagccgtgctcctgctgggccggaaaaccacgacggctgatgccgagggcgacgtc
atcgagacgcgccccgttcccgagatcacccccgaactgctggcaaccctgacccggcgt
tttaccggcccgctggcgcagattccgcccatgtattccgcgctcaagaaagacggcaag
gcactgtacgaatacgcgcgcaaaggcgaagacgtggagcgggaagcgcgccacatcacg
atttacaagctggatatggctctgacccatgacgagcgggcgccggcagctatcaaaatc
accgtgacctgcagcaagggcacctacattcgcacgcttggtgaagacatcggcgaggcg
atcggttgcggcgctcacctcgggtccctgaggcggctggagaccggcggctatgtcgct
tcgcagtgcgtgggcctgccggcgctggaagccatgagcgagcagcagcgcgaagcctgc
ctgctgccagttcaatcactcgtcgccaactatccggttgtcacactcgatgccgataat
gcagggcgctttttgagcggcctgcgccgtcgcggcagccccggccaatggggtccggac
gcggtgctggtgcaggtgtacggtagcgacccggcggcttttctcggctcggcccatgtc
atggctgacgagttgattccggggcgcctgctcagcccgattgaaatccaggacatgctg
gccccgcgtccgcctgttatttccaaccctgcggcaagcgccgcaacggcttag
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