Polaromonas sp. JS666: Bpro_4139 Help Entry Bpro_4139         CDS       T00343                                  Name (GenBank) UvrA family protein   KO K03701   excinuclease ABC subunit A Organism pol  Polaromonas sp. JS666 Pathway pol03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pol00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     Bpro_4139  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pol03400]     Bpro_4139 DNA repair and recombination proteins [BR:pol03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Bpro_4139   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       Bpro_4139 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_inter ABC_tran SMC_N AAA_21 AAA_29 nSTAND1 AAA_16 AAA_23 RsgA_GTPase AAA_22 AAA_18 AAA_25 NACHT Viral_helicase1 AAA_33 UvrA_DNA-bind DnaJ_CXXCXGXG nSTAND3 DUF4350 RNA12 Anti-TRAP BCA_ABC_TP_C SAM_3 YmcF-like Motif Other DBs NCBI-ProteinID:  ABE46031 UniProt:  Q124L1 LinkDB All DBs Position complement(4345838..4351912) Genome browser AA seq 2024 aa AA seqDB search MFDLFRKDPAMSQGTIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLFAE GQRRYVETFSAYARQFLDRMDKPAVDKVEGVPPAIAIDQSNPVRSSRSTVGTMTELNDHL KLLYARSAQLFDKQTAQLVRHDSPESIYAGLMARTAAVEQAQLSAAPPQRELAPLHDERG SATPEAREATSVGVRLVMTFPVELPGNTSAEEVTQWLSASGFTRVHAERQISTPAGPHKL LDVVADRFRIQTTEKVRAIEAIEMALKRGGGRLNVYVMGAGPASPSSATPEEMWRFSTGL HCPDSDTRYTDPTPSLFSFNSAMGACETCRGFGRVIGVDYGLVIPNDKLTLRAGAIKVMQ TPAWQEAQDDLMRHAETAGIPRDTPWYKLTPEQQAWVINGSPSWNGKWNQHWFGIKRFFA YLESKAYKMHIRVLLSKYRSYTQCETCGGARLKLESLLWRLGSKEAADAVLPPGQRFMPV GVQWSRQQLEALPGLCLHDLMRLPIDRLQKFFASLSLAAEGDDAEQKALKLLFEEIQTRV KYLCDVGIGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDMNRI TQAMHRLRDAGNTLVVVEHDPAVMLAADRMIDMGPGPGEKGGQIVFDGTPEDLRHADTLT GAYLGSRKRVGLGLKRAVSDNTPRLILEGARDHNLKNLTVEFPLQRLVCVTGVSGSGKST LMQDILAPALLRQFGKATETPGLHDRLMGADHLTDVVFVDQSPIGKTARSNPASYVGAWD AVRELFAQSPLARQRSYTATKFSFNNGDGRCPTCGGSGFEHVEMQFLSDVYLRCPDCDGK RYRPEILEVTIERKAIGQLKPVLMNVSDVLELTVSEAVQLFAQDREVLRALQPIVDVGLE YVKLGQPVPTLSGGEAQRLKLAGFLAEASRTASKSSASKQALALKHPGRGTLFLFDEPTT GLHFDDIAKLMRALRKLMDAGHSLIVIEHNLDVIRSADWLIDLGPEGGEGGGLLVAQGTP EEVRQHPTSHTAKALREYELAMGQVHGVEEVRPKAWTTRPAFSNLIQIVNAKENNLKSLS VDIPRGKFNVVTGVSGSGKSTLAFDILFNEGQRRYLESLNAYARSIVQPAGRPEVDAVYG IPPTVAIEQRLSRGGRKSTVGTTTEVWHFLRLLYVKLGVQHCTKDGAAVMPQSPESIAAQ LLKTYRGQHIGLLAPLVIARKGVYTELADWARPRGYTHLRIDGEFLPTTGFPRIDRFKEH TVELPVADIHVTPENEAALRVALATALEHGKGVVHVLAPLDGLRGAMMAGASTKGLGRLE AFSTKRACPVCSTSYPELDPRLFSYNSKHGWCPDCVGTGVKLSKEQRKVFDDSVRDDDNK GREQTFGEPEVDDVVDAACPTCEGTRLNKQARAVKFAGVGIADIAGLSVTDVRRWVEKLA LAGREAGIARDLVPEIKSRLEFLEDVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQG VCYVLDEPTIGLHPRDNQILLSALGKLSDRGNTLVVVEHDEDTIRRADNIIDIGPGAGKR GGQLVAQGTAAQLSAVPESLTGRYLAHPLIHPLHARRETEKPLTPALSPEGRGSETGLLP LPLGEGGGEGSPAKPLSKQKQAALKAAALKAAAASASALHNAAPAAASKFTSWLTVVNAG LHNLKSVSVDVPLYRLVAVTGVSGSGKSTLARDVLLTNVHAGVMLRSTKAGRDADDKGKT PDWAGCERIEGYAAVDRVLEVDQTPIGKTPRSCPATYIGFWDTIRKLFADTLEARARGYG AGRFSFNTGEGRCPTCEGAGVRTIGMSFLPDVKVLCETCHGARFNPETQAVTWRGKSIGD VLKMEVDEAVAFFASMPSIAHPLQLLKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKV RDDITRRGQKAPHTLYVLDEPTVGLHMADVEKLIHVLHRLVNGGHSVVVIEHDLDVVAEA DWVIDLGPDGGDAGGQVVASAPPEAVVKLGTHTGNALQSVLARV NT seq 6075 nt NT seq  +upstreamnt  +downstreamnt atgtttgacctcttcaggaaagacccagcaatgtcccagggaaccatccgcatccgcggc gcgcgccagcacaacctcaaaaatcttgacctggatatccgcaccggggagctgacggtg gtcaccggccccagtggttcgggaaagtcctcgctggtgttcgacacgctgttcgccgaa ggccagcgccgctatgtcgagacgttctcggcctacgcccggcagtttctggaccgcatg gacaagcccgctgtcgacaaggtggagggcgtgccgccggccattgcaatcgaccagagc aacccggtgcgcagttcgcgctccaccgtgggcacgatgacggagctcaatgaccacctg aagctcttgtatgcccgctccgcccagctgtttgacaaacagacggcacagctggtgcgc catgattcgccggaatcgatttatgcgggactgatggcgcgcacggcagccgtggagcaa gcccaactttcggcagcgccaccccagcgagaattagcccctcttcatgatgaaaggggc agcgcaacgccggaggcacgcgaagcgacaagcgtgggggtccgtcttgtgatgaccttc ccggtcgagctgcccggcaacaccagcgctgaagaggtgacgcaatggctgtccgccagc ggcttcacgcgggtgcatgccgagcggcagatcagcacaccggccggcccgcacaagctg ctcgacgtggtggctgaccgctttcgcatccagaccaccgaaaaagtccgggcgattgaa gccatcgaaatggcgctgaaacgcggcggcggccggctcaatgtgtatgtgatgggcgca ggccccgcgtcgccctcttccgccacgcccgaagagatgtggcgcttctccaccggcctg cattgccccgacagcgacacgcgctacaccgacccgacaccgtcgctgttttccttcaat tcggccatgggcgcctgcgagacctgccgcggcttcggccgggtcatcggcgtcgactac gggctggtgatacccaacgacaagctcacgctgcgcgccggcgccatcaaggtcatgcag acgccggcgtggcaggaagcgcaggacgatttgatgcgccatgccgaaacggccggcatt ccacgcgacacaccctggtacaagctcacgcccgagcagcaggcctgggtgatcaacggt tcgccgagctggaacggcaaatggaaccagcactggttcggcatcaagcgcttctttgcc tacctggaaagcaaggcctacaaaatgcacatccgtgtgctgctgtccaagtaccgcagc tacacccagtgcgagacctgcggcggcgcgcgcctcaagctggagtcgctgctctggcgg cttggctccaaagaggctgccgatgcggtgctgccgcctggccagcgcttcatgccggtg ggcgtgcagtggagccgccagcagctcgaagccttgccgggcctgtgcctgcatgacctg atgcgcctgccgattgaccgcctgcagaaattctttgccagcctgtcgctggccgccgaa ggggacgatgcggaacagaaggccctcaaactgctgttcgaggaaatccagacccgcgtg aaatacctgtgcgatgtcggcattggctacctcacgctggaccggcaaagccgcacgctg tcgggtggcgaggtgcagcgcatcaacctcaccaccgcgctgggcacctcgctggtcaac acgctgttcgtgctcgatgagccgtccatcggcctgcatccgcgcgacatgaaccgcatc acccaggccatgcaccggttgcgcgatgccggcaatacgctggtggtggtggagcatgac cccgccgtgatgctggcggccgaccgcatgatagacatgggacccggcccgggcgagaag ggcgggcagatcgtgtttgacggcacgcccgaggacctccggcacgccgacacgctgacc ggcgcctacctgggctcgcgcaagcgggtgggcctggggctcaagcgcgcggtgagcgac aacactccgcgcctcatcctcgaaggcgcccgcgaccacaacctgaaaaatctgacggtg gagttcccgctgcagcgcctggtgtgcgtcaccggtgtcagcggctccggcaagtccacg ttgatgcaggacatcctcgcgcccgccttgctgcgccagtttggcaaggccacggaaacg ccgggcctgcatgaccggctcatgggggccgaccacctgaccgacgtggtgtttgtcgac cagtcgcccatcggcaagacggcgcgctccaaccccgcgagctatgtaggcgcttgggat gcggtgcgcgaactgtttgcccagtcaccgctggccaggcagcgcagctacaccgccacc aaattcagtttcaacaacggcgacgggcgctgcccgacctgcggcggctcgggcttcgag catgtggagatgcagtttttgagtgacgtgtacctgcgttgccccgactgcgacggcaag cgctaccggccggaaatcctggaggtgacgattgagcgcaaggccatcggccagctcaag ccggtgctgatgaatgtgtccgatgtgctggagctgacggtcagcgaagccgtgcagctg ttcgcgcaggaccgcgaagtgctgcgcgcgctgcagcccatcgtggatgtgggcctggag tacgtgaagctgggccagcccgtgcccacgctgtcgggcggcgaggcgcagcgcctcaag ctggctggctttctggccgaagcctcgaggacggcaagcaagagcagtgcaagcaagcag gcgctggcgctcaagcacccgggccgcggcacgctgttcctgtttgacgagccgaccacc ggcctgcactttgacgacattgccaaactcatgcgcgcgctgcgcaagctgatggatgcg ggccattcgctgatcgtcattgaacacaacctggatgtgattcgctcggccgactggctg atcgacctcgggcccgagggcggcgaggggggcggcctgctggtggcccaaggtacgccc gaagaggtgcgccagcacccgacctcgcacaccgccaaggcgctgcgcgagtacgagctg gccatgggccaggtgcatggcgtggaagaggtccggcccaaggcctggaccacgcggccg gccttctccaacctgatccagatcgtcaacgccaaggaaaacaacctcaagagcctgtcg gtcgacattccgcgcggcaagttcaatgtggtcaccggcgtgtcaggctcgggcaagtcc acgctggcctttgacattttgttcaacgaaggtcagcggcgttatctcgagtcgctcaat gcctatgcgcgcagcatcgtgcagccggccgggcggcctgaagttgatgcggtgtacggc attccgcccaccgtggccatcgaacagcgcctgtcgcgcggcgggcgcaagtccaccgtg ggcaccaccaccgaggtctggcatttcctgcgcctgctgtatgtgaagctgggggtgcag cattgcaccaaggacggtgcggcggtgatgccgcagagcccggagagcatcgcggcccag ttgctcaagacctaccgcggccagcacatcggcctgctggcgccgctggtgattgcccgc aagggcgtctacaccgagttggccgactgggcccggccgcgcggctatacgcatttgcgc atcgacggcgagtttttgccgaccaccggttttccgcgcattgaccgcttcaaggagcac acggtcgagctgccggtggcggacatccacgtcacgcccgagaacgaagccgcgctgcgg gttgcgctggccactgcactggagcatggcaagggcgtggtgcatgtgctggccccgctg gacggcctgcgcggcgcgatgatggcgggcgcctccaccaagggcctgggccggctggag gccttctccaccaagcgcgcctgcccggtctgctcgacgtcttaccccgaactcgatccg cgcctcttcagctacaacagcaagcacggctggtgccccgattgcgtggggacgggcgtc aagctcagcaaggagcagcgcaaggtgtttgacgactcggtgcgcgacgacgacaacaag ggccgcgagcagacttttggcgagccggaggtcgacgatgtggtcgatgccgcttgcccc acctgcgaaggcacgcgcctgaacaaacaggcgcgcgcggtgaaatttgccggtgtgggc attgccgacatcgccggcctgtcggtgacggatgttcgccgctgggttgaaaaactggcg ctggcaggccgcgaggccggcattgcccgcgacctggtgcccgaaatcaaaagccggctg gagtttctcgaggacgtgggcctgggctacctcacgctggaccgcggcgcgcccacgctg tcgggcggcgaagcccagcgcatccggctggcggcgcaactggggtccaacctgcagggc gtctgctacgtgctcgacgagcccaccatcggcctgcatccgcgcgacaaccagatcctg ctcagcgcgctgggcaagctcagcgaccgcggcaacacgctggtggtggtggagcacgac gaagacacgatacgccgtgccgacaacatcatcgacatcgggcccggcgcgggcaagcgc ggcgggcaactggtggcccagggcacggcggcgcaattgtctgcggtgccggagtcgctg accggccgctacctcgcacacccgctgatccatccgctgcatgcccgccgcgaaacggag aagcccctcaccccagccctctccccagaggggcgagggagcgaaacgggcttgctccct ctccctctgggagagggcgggggtgagggctcccctgccaagcccctgagcaaacaaaag caggccgcgctgaaagccgcagcattgaaggcggccgcagcaagcgccagtgcgctgcac aacgccgcacccgctgccgcgagcaaattcacctcctggctcaccgtggtcaatgccggc ctgcacaacctcaagagcgtgtcggtcgatgtgccgctgtaccggctggtggcggtcacc ggcgtgtcgggctccggcaagtccacgctggcgcgcgacgtgctgctgaccaatgtgcat gcgggcgtgatgctgcgctccaccaaggccgggcgcgatgctgacgacaagggcaagacg cctgactgggcgggctgcgagcgcatcgagggctacgccgcggtggaccgcgtgctggaa gttgatcagacacccatcggcaagacgccgcgctcctgcccggccacctacatcggtttc tgggacacgattcgcaagctgtttgccgacacgctggaagcgcgggcgcgcggctacggg gccgggcgcttcagcttcaacaccggcgaggggcgctgcccgacctgcgagggcgccggt gtgcgcaccatcggcatgagctttctgcccgacgtgaaggtgctgtgcgagacctgccac ggcgcgcgcttcaaccccgagacgcaggccgtgacctggcgcggcaaaagcataggcgac gtgctgaaaatggaagtggatgaggcggtggcgttttttgcctccatgcccagcattgcc cacccgttgcagctgctcaaggatgtgggcctgggctacctcacgctgggccagccttcg ccaacgctgtcgggcggcgaggcgcagcgcatcaagctggtgacggagctgagcaaggtg cgcgacgacatcacgcggcgcggccagaaggcgccgcacacgctgtacgtgctggacgag cccacggtgggcctgcacatggccgacgtggaaaagctgattcacgtgctgcaccgcctg gtcaacggcggccacagcgtagtggtcatcgagcacgacctggacgtggtggctgaggcc gactgggtgattgacctgggtcccgatggcggtgacgccggtgggcaggtcgtcgcctcg gcgccgccggaggctgtcgtgaagctgggcacgcacaccgggaatgcgttgcaaagtgtg ctggcgagggtgtaa

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