Polaromonas sp. JS666: Bpro_4151
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Entry
Bpro_4151 CDS
T00343
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pol
Polaromonas sp. JS666
Pathway
pol03030
DNA replication
pol03430
Mismatch repair
pol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bpro_4151
03430 Mismatch repair
Bpro_4151
03440 Homologous recombination
Bpro_4151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pol03032
]
Bpro_4151
03400 DNA repair and recombination proteins [BR:
pol03400
]
Bpro_4151
Enzymes [BR:
pol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bpro_4151
DNA replication proteins [BR:
pol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bpro_4151
DNA repair and recombination proteins [BR:
pol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bpro_4151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
PAS_7
DNA_pol_A_exo1
PAS_4
Peripla_BP_2
FAM184
Motif
Other DBs
NCBI-ProteinID:
ABE46043
LinkDB
All DBs
Position
4363869..4366058
Genome browser
AA seq
729 aa
AA seq
DB search
MTPRIRLAVGLGGLYGLLVVLFGILGAVLWADMRDAERLAVLAIMRERYALALVIILLAW
IGLGLLAWGLFRIYVLAPLSLREQALVMVNSNPALRLQELGAPEIRTLVQVVNTLADQRE
SLLRDVEQKILQAKASVEEEKNRLAALMSELTQSVVVCNLDGRILLYNNRARLQFQVPGD
GAQGGSAALIGLGRSIFALMERGLITHALERVQHRLRHGSAQPSANFVTTTRTGQLIRVQ
MAPVFSNAWRDNDAQDRATGERVISGYVLLLDNITRNVETQSRRDLLLQTLTEGSRAALG
NIRAAVENLLQYPDMEIGQRDRFVGVIRDEAEAMSQRINHASAEFADTLKARWPLEDMHG
ADLVQALQRRIEQKSGLSASSEEVASGLWVKVDSYSLLQGLSYLAARLRDECGVGAVTLR
LRPSGRLAQLDLLWSGAALDAAMLANWEQSPMNSDGEGIPLTLREVIERHGGELWHQRDQ
NTQQPLIRMLLPTAAAQDAADPAVWLRHESRPEYYDFDLFKQTEETRALDDRLLTQLSYT
VFDTETTGLEPSAGDEIIQIGAIRIVNGRLLRNETIDQLIDPRRRLKPESIAIHGITEDM
VKGQPTIEQALPAFHEFCEDTVLVAHNAAFDMRFLQLKEASTGIVFRQPVLDTLLLSALL
HPNQESHRLEAIAGRLGINVIGRHTALGDAIVTGEIFLKMIPLLAQQNIHTLRQAREAAA
RTYYARVSY
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgacccctcgaatccggctcgctgtgggactcggcggtctgtatggactgctggtcgtg
ctctttggcatcctgggtgcggtgctgtgggccgacatgcgggacgccgagcggctggcg
gtgctggccatcatgcgggagcgttacgcgctggccttggtcatcatcctgctggcctgg
atcgggctggggctgctggcctggggtctgttccggatctatgtgctggcccctttgagc
ctgcgtgaacaggccctggtgatggtcaattccaacccggcgctgcgactgcaagagctc
ggcgcccccgagatccggacgctggtgcaggtcgtcaatacactggccgaccagcgcgaa
tcgctgctgcgcgatgtagagcagaaaatcctgcaagccaaggcctcggtcgaggaggaa
aaaaaccgtctggccgcgttgatgtcggaactcacgcaaagcgtggtcgtgtgcaacctg
gatggacgcatcctgctctacaacaaccgtgcgcgcctgcagtttcaggtgcctggagat
ggcgcgcaaggtggcagcgcagccttgatcggcctgggccgttccatttttgccctcatg
gaacgcggtctcatcacgcacgccctggagcgcgtgcagcaccgcctcaggcacggcagc
gcacagccctcagccaacttcgtcaccaccacgcgcaccgggcaactgatacgcgttcaa
atggccccggtcttcagcaacgcctggcgcgataacgacgcgcaggaccgcgccaccggg
gagcgggtcatcagcggctacgtgctcctgctcgataacatcacccgcaatgtggaaacg
caaagccggcgcgacctgctcctgcaaacgctcaccgaaggcagccgcgccgcgttggga
aatatacgggcggcggtagaaaacctgctgcaatacccggacatggagatcggccagcgc
gaccgcttcgtgggcgtgatccgcgacgaagcggaggccatgagccaacgcatcaaccac
gccagcgccgagttcgccgacacactcaaggcgcgctggccgctggaagacatgcatggc
gcagacctggtgcaggccttgcagcgacgcattgaacaaaagtccggtttgagcgccagc
agcgaagaggtcgccagcggcctgtgggtcaaggtggacagctactcgttgctgcagggc
ctgagctacctcgccgcccggctcagggatgagtgcggcgtgggcgccgtgaccttgcgt
ctgcggccgtccgggcggctggcacagctggacctgctctggtcgggcgccgccctggac
gcggcgatgctggcgaactgggaacagtccccgatgaactctgacggcgaaggcatccca
ttgacgctgcgcgaagtgatcgaacgccatggcggcgaactctggcaccagcgcgaccag
aatacgcagcaacccctgatccggatgctgctgcccaccgccgcggcgcaggatgcggcc
gacccggccgtatggctgcgccatgagagccgccccgagtactacgactttgacctgttc
aagcaaaccgaggagacacgtgcgctggatgatcgcctgctgacgcaactgagctacacg
gtgtttgacaccgagaccaccggactggagccttcggccggcgatgagatcatccagatt
ggcgccatccgcatcgtcaacggtcgcttgctcaggaacgagaccatcgaccagctgatt
gatcccaggcggcggctcaagcccgaatccattgccatccacggcatcaccgaagacatg
gtcaaagggcaaccgacgattgagcaggctcttcccgcctttcatgaattctgcgaggac
acggtgctggtggcgcacaacgccgcgtttgacatgcgtttcctgcagctcaaggaggca
tccaccggcatcgtgttccggcaaccggtgctggacaccttgctgctgtcggcgctgctt
catcccaaccaggaatcacaccgcctggaggccattgccgggcgcctgggcatcaacgtg
atcgggcgccatacggccctgggcgatgcgatcgttaccggagagattttcctcaagatg
attcccttgctggcgcaacagaacattcacaccttgcgccaggcacgcgaggcggccgcg
cgcacctattacgccagagtcagttactaa
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