Polaromonas sp. JS666: Bpro_4441
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Entry
Bpro_4441 CDS
T00343
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pol
Polaromonas sp. JS666
Pathway
pol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bpro_4441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pol03021
]
Bpro_4441
03400 DNA repair and recombination proteins [BR:
pol03400
]
Bpro_4441
Enzymes [BR:
pol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bpro_4441
Transcription machinery [BR:
pol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bpro_4441
DNA repair and recombination proteins [BR:
pol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bpro_4441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ABE46328
UniProt:
Q123G4
LinkDB
All DBs
Position
complement(4690162..4694388)
Genome browser
AA seq
1408 aa
AA seq
DB search
MKSLLDLFKQFTPDEHFDAIKIGMASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMSEDDYDAKRKEYGDEYVAKM
GAEGIKDLLEGLDLDVEIDKLRNDLTGSEIKIKKNAKRLKLMEAFKKSGIKPEWMVLDVL
PVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEA
VDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITMGPTLK
LHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVESGTPVVWDILEEVIKEHPVM
LNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSVEAQMEART
LMLASNNILFPANGEPSIVPSQDVVLGLYYTTRDRTNGKGEGLVFSDTGEVRRAFDAGEL
DLNARISVRLTEWTKNKETGEFIPSTKLWETTGGRALLSEILPKGLPFSNINKALKKKEI
SKLINVSFRKCGLKETVVFADKLLQSGFRLATKAGISICIDDMLVPKEKHDIISRAQKEV
KEIEQQYVSGLVTSGERYNKVVDIWGKSGDEVSKVMMAQLSKEKVIDRHGKEVEQESFNS
IYMMADSGARGSAAQIRQVAGMRGLMAKPDGSIIETPITANFREGLNVLEYFISTHGARK
GLADTALKTANSGYLTRRLCDVVQDLVVTEDDCGTQEGSLMRAIVEGGEVIESLRERILG
RTAVEDVLHPENRSVLAKAGAMLDEDLIDELEAAGVDEVKVRTALTCETRFGLCAKCYGR
DLGRGGLINIGEAVGIIAAQSIGEPGTQLTMRTFHIGGAASRAAIASSVEAKSNGVIGFN
APMRYVTNGKGELVVIARSGEIVIHDEHGRERERHKVPYGATLTVKADQTIKAGAILANW
DPLTRPIITEFAGKVLFENVEEGVTVAKQVDDVTGLSTLVVIDPKRRGATKVIRPQVKLI
DATGNEVKIPGTDHSVTIGFQVGALVQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRV
AELFEARTPKDKGTLAEMTGTVSFGKETKGKVRLQITDPDGKVWEDLVPKEKNILVHEGQ
VVNKGESIVDGPADPQDILRLLGMEELARYIVDEVQDVYRLQGVKINDKHIEVIVRQMLR
RVVVENVGDSSYIAGEQVERSAMLDANDALRAEGKIPATFSNLLLGITKASLSTDSFISA
ASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGMAYHEARKAKDLMDDAERRA
IAEAEAAELEAATATAPADAGGDSPATE
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcattactcgacctgttcaagcaattcacgccggatgagcatttcgatgccatc
aagatcggcatggcctcgcccgagaagatccgttcgtggtctttcggcgaagtcaaaaag
cctgaaaccatcaactaccgcaccttcaagccagagcgcgacggtcttttttgcgccaag
atctttggccccatcaaggactacgaatgcctgtgcggcaagtacaagcgcctcaagcac
cgcggcgtcatctgcgagaagtgcggcgttgaagtcacgcagaccaaggtccgccgtgag
cgcatgggtcacatcgacctggccgctccctgcgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcctggtgctcgacatgacgctgcgcgacatcgagcgcgtgctgtac
ttcgaagcttacgtggtgaccgaccccggcatgaccccgctgaagaaattcagcatcatg
tcggaagacgactacgacgccaagcgcaaggaatacggtgatgagtacgtcgccaagatg
ggcgccgaaggcatcaaggacctgctcgaagggctcgacctcgacgtcgagatcgacaag
ctgcgcaacgacctgaccggttccgaaatcaagatcaagaaaaacgccaagcgtttgaaa
ttgatggaagcgttcaagaagtccggcatcaagcccgagtggatggtgctggacgtgctg
cctgtgctgccgccggacctgcgtccgctggtgccgctggacggcggccgcttcgcgacc
tccgacctgaacgacctgtaccgccgcgtcatcaaccgcaacagccgcctgcgccgtctg
ctggagctcaaggctcccgagatcattgcccgcaatgaaaagcgcatgctgcaggaagcg
gtggattcgctgctggacaacggccgccgtggcaaggccatgacgggcgccaacaagcgc
gcgctgaagtcgctggccgacatgatcaagggcaagtcaggccgtttccgccagaacttg
ctgggcaagcgcgtcgactactccggccgttccgtgatcaccatgggcccgacgctcaag
ctgcaccagtgcggcttgcccaagctgatggcgctcgagctgttcaagcctttcatcttc
tcgcgtctcgaagccatgggcatcgcgaccaccatcaaggcggccaagaaggaagtcgaa
tccggcacgccagtggtgtgggacatcctggaagaggttatcaaggagcaccccgtgatg
ctgaaccgtgcgcctacgctgcaccgtctcggtatccaggcctttgaacccatcctgatc
gaaggcaaggccatccagctgcacccgctcgtctgctcggccttcaacgccgactttgac
ggtgaccagatggccgttcacgtgccgctgtcggtggaagcgcagatggaagcccgcacg
ctgatgctggcttcgaacaacatcctgttcccggccaacggcgagccctccattgttccg
tcgcaagacgtggtgctgggcctgtactacacgacccgcgaccgtaccaacggcaagggt
gaaggcctcgtgttctcggacaccggtgaggtgcgccgtgcattcgatgcgggcgaactg
gacctgaacgccaggatcagcgtgcgcctgaccgaatggaccaagaacaaggagaccggc
gagttcatcccgtcgaccaagctgtgggaaaccaccggtggccgtgcgctgctgtctgaa
atcctgcccaagggcctgcctttctctaacatcaacaaggcgttgaagaaaaaggaaatc
tccaagctgatcaacgtgtctttccgcaagtgcggcctgaaagagacggtggtgtttgcc
gacaagctgctgcagtcgggcttccgcctggccaccaaggccggcatctccatctgtatc
gacgacatgctggtgcccaaggaaaagcacgacatcatttcgcgtgcccagaaggaagtc
aaagagatcgagcagcagtatgtctcgggcctggtgacatccggcgagcgctacaacaag
gtggttgacatctggggcaagtccggcgacgaagtctccaaggtcatgatggcccagctt
tcgaaagaaaaagtcatcgaccgccacggcaaggaagtcgagcaggaatccttcaactcc
atctacatgatggccgactccggcgcccgcggttctgccgcgcagattcgccaggtggcc
ggtatgcggggtctgatggccaagcctgacggctccatcatcgagacgccgattaccgcg
aacttccgcgaaggcctgaacgtgctggagtacttcatctccacccacggtgcccgtaag
ggtttggctgacaccgcgctgaaaacggccaactccggctacctgacgcgtcgcctgtgc
gacgtggtgcaggatctggtggtgaccgaagacgactgcggcacgcaagagggctcgctg
atgcgcgccatcgtcgagggtggtgaggtgatcgaatcgctgcgcgaacgtatcctcggc
cgcaccgcggtggaagatgtgctgcatcccgagaaccgctcggttctggccaaagccggt
gccatgctggacgaagacctgatcgacgaactcgaagcggccggcgtcgacgaagtgaaa
gtgcgcacggccctgacctgcgaaacccgcttcggcctgtgcgccaagtgctacggccgc
gatctgggccgcggtggcctgatcaacatcggtgaggcggtcggtatcatcgccgcccag
tcgattggtgagcccggcacgcagctgaccatgcgtaccttccacatcggcggtgctgcg
tcgcgtgcggcgattgcctccagcgtcgaagccaagtccaacggcgtgatcggtttcaat
gccccgatgcgttatgtgaccaacggcaagggcgaactggtggtgattgcccgttccggc
gagatcgtcatccatgacgagcacggccgcgagcgtgagcgtcacaaggtgccgtacggt
gccacattgacggtcaaggccgaccagaccatcaaggctggcgccatcctggccaactgg
gatccgctgacgcgccccatcattaccgaattcgccggcaaggtgctgttcgagaatgtg
gaagaaggcgtcaccgtggccaagcaggttgacgatgtgacgggtctgtccaccctggtg
gtgatcgatccgaaacgccgcggcgcgaccaaggtgattcgtccccaggtcaaactgatc
gacgcgaccggcaacgaagtcaagatccccggcaccgatcactcggtgacgatcggcttc
caggtgggtgcgctggttcaggtgcgcgacggccaggacgtgggccccggcgaagtgctg
gcccgtatcccggtcgaaggccagaagacccgcgacattaccggcggtctgccgcgcgtg
gccgagctgttcgaagcccgtacgccgaaagacaagggcacgctggccgagatgaccggt
accgtgtcgttcggtaaagagaccaaaggcaaggttcgcctgcagatcaccgatccggac
ggcaaagtctgggaagacctcgtgcccaaggagaagaacattctcgtgcacgaaggccag
gtggtgaacaagggcgagtcgattgtggacggcccggccgacccgcaagacatcctgcgt
ttgctgggcatggaagagctggcccgctacatcgtcgacgaagtgcaggacgtttaccgc
ctgcagggcgtgaagatcaacgacaagcacatcgaagtgattgttcgccagatgctgcgc
cgtgtcgtcgtcgaaaacgtgggcgactccagctacatcgccggtgagcaggttgagcgt
tcggccatgctggatgccaacgacgccttgcgcgccgagggcaagatcccggcaaccttc
agcaacctgctgctcggtatcaccaaggcctcgctgtcgaccgattcgttcatttccgcg
gcttccttccaggaaaccacccgcgtgctcaccgaggctgccatcatgggcaagcgcgac
gagctgcgcggtctgaaggaaaacgtgatcgtcggccgcctgattccagccggtaccggc
atggcctaccacgaggcacgcaaagccaaggacctgatggacgacgccgagcgccgtgcc
attgccgaagctgaagccgctgaactggaggctgcgacagccacggcacctgccgatgcg
ggcggcgacagtcctgcaaccgagtaa
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integrated database retrieval system
