Polaromonas sp. JS666: Bpro_4450
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Entry
Bpro_4450 CDS
T00343
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pol
Polaromonas sp. JS666
Pathway
pol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bpro_4450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pol03400
]
Bpro_4450
Enzymes [BR:
pol01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Bpro_4450
DNA repair and recombination proteins [BR:
pol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bpro_4450
Prokaryotic type
Bpro_4450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABE46337
UniProt:
Q123F5
LinkDB
All DBs
Position
complement(4704458..4705207)
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AA seq
249 aa
AA seq
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MTDLFLDEASALGVADRLTSADPLAWPVAPGWEPVTKAFFSSATGQKLLDFLRGRLADGV
VIFPPRPLRALELTSPEQVRVVILGQDPYHGRGQAEGLAFSVAPGVPLPPSLRNIFKELQ
RDLGTPPPAFPVPGGSLVRWATHGVLLLNTCLTVEEGLPASHAGRGWEVLTDAVIRQVSQ
GDHPVVFMLWGAHAQSKRALIDVGRHKVLVANHPSPLSALRPPLPFIGCGHFSQAVGGLD
GGGLPWTVI
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgacggacctgtttctggatgaggcgtcggcgctgggcgtcgcggaccgcctgaccagc
gcggaccccttggcctggccggtagcgcccgggtgggagcctgtcaccaaggcgtttttt
tccagcgcgaccggccagaagctgctggattttctgcgtggccggctggcggacggcgtc
gtgatcttccccccccggccgctgcgcgcgctggaactcacgtcgccggagcaggtgcgc
gtggtcatcctcggccaggacccctatcacggccgcggccaggcggaagggctggccttt
tcggtggcgccgggcgtgcccctgccgccgtcattacgcaatatcttcaaggagctgcag
cgcgacctgggcacgccaccgccggcgtttccggtgcccggcggcagcctggtgcgttgg
gcgacccacggcgtgctgctgctcaacacctgcctgacggtggaggaggggctgccggcc
agccatgcggggcgcggctgggaggtcctgacggatgcggtgatccggcaggtttcgcag
ggcgaccatccggtggtgttcatgctgtggggggcgcatgcccaaagcaagcgtgcgctg
atcgacgttggccgccacaaggtgctggtggccaaccacccgtcaccgttgtcggcgctg
cggccgccattgccttttatcggctgcgggcatttttcgcaggcggttggcgggctcgat
gggggcgggctgccttggacggtgatctga
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