Polaromonas sp. JS666: Bpro_5077
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Entry
Bpro_5077 CDS
T00343
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pol
Polaromonas sp. JS666
Pathway
pol03420
Nucleotide excision repair
pol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bpro_5077
03430 Mismatch repair
Bpro_5077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pol03400
]
Bpro_5077
Enzymes [BR:
pol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bpro_5077
DNA repair and recombination proteins [BR:
pol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bpro_5077
MMR (mismatch excision repair)
Other MMR factors
Bpro_5077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
ResIII
CobA_CobO_BtuR
AAA_22
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ABE46948
UniProt:
Q120U4
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All DBs
Position
1:complement(188354..190156)
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AA seq
600 aa
AA seq
DB search
MAAPARPFFCAFMAFTPTQQEAIDHDGNLMIVAGPGSGKTTTSVAKARRILSDPRRSLIM
VTFTKEGAEEMRKRLEKAQVGSGQPPIAKHRLRVGTFHSIALQHLFEHRTHEKVLGPAQQ
GILLNESLSPFSSDMELVKDIRKEFESYMYAIDREAHELSGPAARVVSRYMERLRASRAT
DLYTVMRDCALFADNGTIPPMRYTDMLVDEGQDTDELQKVWIFAHARAGINVTIVGDDDQ
SIYEWRHALGYSGMKSFMDTFGAKRIELGDNFRCREEILTHAVLLVQNNQNRLAKHLVAQ
RGPGGKIASYHTASPVSQCKELADLISRTPNAHSNVAVLARKNKSLNDLELSLTERQVAY
VRLGKSFWDNPWVATYLGLLQSLVDASPVGVFGCLGTLGLDDAVKTELLQSMRGRAEDFL
EAQVPDLDSATSTDAALIKEFAKFCKYWRDQLRSQAGGSVDEVVLDVGKWLASKQRSKGI
KEVIEGAAATLKMLKGTISSRLSFIARNKNSTETGPVTLMTMHASKGMEFETVHVIDAGK
PEDGSDLVNTEAERRLMYVALTRAKNRCFVWYSGEPHPTIREAQLQVLHEFDKLLEKVNS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacccgcgcggccttttttttgcgcgtttatggccttcacacctacccaacaa
gaagcgattgaccacgacggcaacctgatgatcgtcgccggcccaggctctggcaaaact
acgacctccgtggccaaggctcgccggattctgagcgacccgcgccgctccctcatcatg
gtcaccttcaccaaggaaggtgccgaggaaatgcgaaaacgccttgagaaggcacaagtg
ggctcaggtcagccccctatcgcaaagcaccgcctgcgcgttggtacttttcacagcatt
gccctccagcacttgtttgaacatcgcacgcacgagaaggtgctgggcccagctcaacaa
gggattctgctcaatgaatccttgagtccgttttccagtgatatggaattggtgaaggac
atccgaaaggaattcgagtcctacatgtacgccattgatagggaggcccatgaactcagt
ggccctgcggccagggtggtgagtcggtacatggagcggctacgcgccagtcgggctacg
gatctgtacacggtcatgcgtgactgcgccctattcgccgacaacggcaccattccgcct
atgcgctacaccgacatgctggtggacgaaggacaggacactgacgaactgcagaaagtc
tggatcttcgcccacgcacgcgctggaatcaatgtcaccatcgtgggggatgacgaccaa
tcaatctatgagtggcgccacgccttgggttacagcggcatgaagtcctttatggacacc
ttcggggcgaagcgcattgagctgggcgacaacttccgctgccgcgaggaaatcctgacc
cacgctgttttgctggtccagaacaaccagaatcggcttgccaagcaccttgttgctcag
cgtggcccgggagggaagatagcctcgtaccacacagcctcgcctgtaagccagtgcaag
gagttggcggacttgatcagcaggacacccaacgcgcactcaaacgtagcggtgctggct
aggaagaacaaatcccttaatgacctggaattgtcgctgacagagcgtcaggttgcgtac
gtccgcctgggcaaatcgttttgggacaacccttgggttgccacctacctgggcttgctc
caatcccttgtggatgcctcgccagtgggggtttttggatgccttgggacgctgggcctg
gacgacgctgtaaaaaccgagctgcttcagtccatgcgtggcagagcggaggactttctt
gaggctcaggtaccggatctcgacagcgcaacatccacagatgccgctctcatcaaggaa
ttcgccaaattctgcaaatactggcgtgatcagttgcgatcgcaagccggcggtagtgtt
gacgaggtggtgcttgatgtaggcaagtggttggcttccaagcagcgttcgaagggcatc
aaggaagttatcgaaggagcagcagccaccctcaaaatgcttaagggcacgatttcaagc
agactgagcttcatcgccaggaacaaaaatagcacggagaccggtccagtcaccctcatg
accatgcacgcgtccaagggcatggaattcgagaccgtccacgtcatcgacgcgggtaag
ccggaggatggctccgacctggtgaataccgaggcagaacgccggcttatgtacgtggcg
ctgacgcgcgccaagaatcggtgttttgtctggtacagcggcgaaccccacccaaccatc
cgtgaagcccaactgcaggtcttgcacgagtttgacaagttacttgaaaaggtcaactcc
taa
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