Polaribacter sp. BM10: BXQ17_02220
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Entry
BXQ17_02220 CDS
T04746
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pola
Polaribacter sp. BM10
Pathway
pola03420
Nucleotide excision repair
pola03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BXQ17_02220
03430 Mismatch repair
BXQ17_02220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pola03400
]
BXQ17_02220
Enzymes [BR:
pola01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BXQ17_02220
DNA repair and recombination proteins [BR:
pola03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BXQ17_02220
MMR (mismatch excision repair)
Other MMR factors
BXQ17_02220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
OB_MalK
AAA_11
HsdM_N
Motif
Other DBs
NCBI-ProteinID:
AQS92957
LinkDB
All DBs
Position
530984..533305
Genome browser
AA seq
773 aa
AA seq
DB search
MNNYLESLNEPQRQAVIQKDGPMIIIAGAGSGKTRVLTYRIAHLMKQGVDSFNILSLTFT
NKAAKEMKARIASVVGQSEAKNLWMGTFHSVFARILRSEADKLGFPTNFTIYDTQDSVRL
ISAIIKEMGLDKERYKAKQILGRISSFKNSLITVRAYFNNSDLQEADMHASRPKVGDIYK
AYVDRCFKAGAMDFDDLLLRTNELLARFPEVLAKYQDRFRYIMVDEYQDTNHSQYIIVRA
LADKFGNICVVGDDSQSIYSFRGANIQNILNFQKDYPEVKTFKLEQNYRSTSNIVNAANS
VIEKNKTKLDKEVWTSNDAGDAINVMRTISDGEEGRFVAQSIWENQMNHQLKPSDFCVLY
RTNSQSRAIEDALRKKNIDYKIYGGISFYQRKEIKDILSYLRILINPNDEEALKRIINYP
ARGIGATTIDKLTIAANHYKKSIFDIIKYIDKIDLKINAGTKNKLQNFMNMMLRFQIEAK
TKNAFEIAETVVKQTQLIKDLEKDGTPEAVSKVENVQELLNGIKDFITDKIEEGQDASLT
TFLEDVALATDFDSEKNDDKPTVSLMTIHQSKGLEYLYVYVVGLEENLFPSAMSMNTRSE
LEEERRLFYVALTRAEKVAYLTYAQTRYRWGKLVDAEPSRFLEEIDDQYLNYITPKSPSP
AVNNFLDKSIFDDAPKGIRFQKPIQRKKMERDLAKKKEITIPKNLKKVSNVSPKMNLFDG
EISKGNIVEHNRFGKGTVIGIEGKGPDKKAEIQFATAGKKKLLLQFAKLKVIG
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttgaataattacttagaatctttaaatgagccgcaaaggcaagctgttatacaaaaggat
ggaccaatgataattattgctggtgccggttctggtaaaacacgtgtattaacctataga
attgctcatttaatgaagcagggtgtagattcttttaatattttgtctttaacctttacc
aataaagctgcaaaagaaatgaaagctagaattgcttctgtggtaggacaaagtgaggca
aaaaacctttggatgggaacttttcattccgtttttgcaagaattttacgttccgaagca
gataaacttggttttccaactaattttacaatttacgatacacaagattctgttaggtta
ataagtgccattattaaagaaatgggcttagacaaagaacgttataaggcaaaacagatt
ttgggaagaatctcttcatttaaaaacagtttaataaccgttagagcatattttaataat
tctgatttgcaagaagcagacatgcatgcaagcagaccaaaagtaggtgatatttataaa
gcatatgtagatagatgttttaaagctggcgcaatggattttgatgacttattgttaaga
accaatgagttgttagcacgttttccagaagttttagcaaaataccaagacagatttcga
tacataatggtagacgagtatcaagatacaaaccattctcaatacattattgttcgtgct
ttggcagataaattcggtaatatttgtgtggtaggagacgactcgcaaagtatttatagt
tttagaggagcaaatattcagaatattttaaattttcaaaaagattatccagaagttaaa
acatttaaattagagcaaaattatcgctctacaagtaatattgtaaatgcagcaaattct
gtaatcgaaaaaaataaaacaaagttagataaagaagtttggacgtctaatgatgccgga
gacgcaattaacgtaatgcgcacaatatccgacggagaagaaggtaggttcgttgcgcaa
tctatttgggaaaaccaaatgaatcatcagcttaaacctagcgatttttgcgttttatat
agaacaaactcacaatctagagcaatagaagacgccttacgtaaaaaaaatattgattat
aaaatttacggaggaatctctttttaccaaagaaaagagattaaagatattttatcttat
ttacgtattttaatcaatcctaatgatgaagaagccttaaaaagaattataaattatcct
gccagaggtattggtgcaacaacaatagacaaattaacaattgcagcaaatcattacaaa
aaatctattttcgatattataaaatatatagataaaatagatcttaaaataaatgctgga
acaaagaataagcttcagaattttatgaatatgatgctacgctttcaaatagaagctaaa
actaaaaatgcctttgaaattgcagaaactgttgtaaaacagacgcaattaattaaagat
ttagaaaaagatggcacaccagaagctgtaagtaaagtagaaaatgtacaagaactttta
aacggaattaaagattttattactgataaaattgaagaaggacaagacgcatctttaact
acttttttagaggatgttgcgttggctacagattttgattcagaaaaaaatgatgacaaa
ccaaccgtttctttaatgacaattcaccaatctaaaggattggaatatttgtatgtttat
gttgtaggattagaagaaaatttatttccgtctgcaatgagcatgaataccagaagcgag
ttagaagaagagcgcaggttgttttatgtagcattaactagagcagaaaaagtagcctat
ttaacgtatgctcaaactcgatacagatggggaaagttagtagatgcagaaccaagtagg
tttttagaagaaatagacgatcaatatttaaattacataacaccaaaaagtccgagtccg
gcagtaaataactttttagacaaaagtatttttgatgatgcgccaaaaggaattcgtttt
cagaaaccaattcaacgaaaaaaaatggagcgagatttagcaaagaaaaaagaaataaca
atacccaaaaacttaaaaaaagtttcaaatgtttctcctaaaatgaatctttttgatggt
gaaatatcaaaaggaaatattgtagaacacaatagatttggtaaaggaacagttataggt
atagaaggtaaaggacccgataaaaaagcagaaattcagtttgctaccgcaggtaaaaag
aaattactattacaatttgctaaattaaaagtgattgggtaa
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