KEGG   Polaribacter sp. BM10: BXQ17_02220
Entry
BXQ17_02220       CDS       T04746                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pola  Polaribacter sp. BM10
Pathway
pola03420  Nucleotide excision repair
pola03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pola00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BXQ17_02220
   03430 Mismatch repair
    BXQ17_02220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pola03400]
    BXQ17_02220
Enzymes [BR:pola01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BXQ17_02220
DNA repair and recombination proteins [BR:pola03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BXQ17_02220
   MMR (mismatch excision repair)
    Other MMR factors
     BXQ17_02220
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 Viral_helicase1 ResIII OB_MalK AAA_11 HsdM_N
Other DBs
NCBI-ProteinID: AQS92957
LinkDB
Position
530984..533305
AA seq 773 aa
MNNYLESLNEPQRQAVIQKDGPMIIIAGAGSGKTRVLTYRIAHLMKQGVDSFNILSLTFT
NKAAKEMKARIASVVGQSEAKNLWMGTFHSVFARILRSEADKLGFPTNFTIYDTQDSVRL
ISAIIKEMGLDKERYKAKQILGRISSFKNSLITVRAYFNNSDLQEADMHASRPKVGDIYK
AYVDRCFKAGAMDFDDLLLRTNELLARFPEVLAKYQDRFRYIMVDEYQDTNHSQYIIVRA
LADKFGNICVVGDDSQSIYSFRGANIQNILNFQKDYPEVKTFKLEQNYRSTSNIVNAANS
VIEKNKTKLDKEVWTSNDAGDAINVMRTISDGEEGRFVAQSIWENQMNHQLKPSDFCVLY
RTNSQSRAIEDALRKKNIDYKIYGGISFYQRKEIKDILSYLRILINPNDEEALKRIINYP
ARGIGATTIDKLTIAANHYKKSIFDIIKYIDKIDLKINAGTKNKLQNFMNMMLRFQIEAK
TKNAFEIAETVVKQTQLIKDLEKDGTPEAVSKVENVQELLNGIKDFITDKIEEGQDASLT
TFLEDVALATDFDSEKNDDKPTVSLMTIHQSKGLEYLYVYVVGLEENLFPSAMSMNTRSE
LEEERRLFYVALTRAEKVAYLTYAQTRYRWGKLVDAEPSRFLEEIDDQYLNYITPKSPSP
AVNNFLDKSIFDDAPKGIRFQKPIQRKKMERDLAKKKEITIPKNLKKVSNVSPKMNLFDG
EISKGNIVEHNRFGKGTVIGIEGKGPDKKAEIQFATAGKKKLLLQFAKLKVIG
NT seq 2322 nt   +upstreamnt  +downstreamnt
ttgaataattacttagaatctttaaatgagccgcaaaggcaagctgttatacaaaaggat
ggaccaatgataattattgctggtgccggttctggtaaaacacgtgtattaacctataga
attgctcatttaatgaagcagggtgtagattcttttaatattttgtctttaacctttacc
aataaagctgcaaaagaaatgaaagctagaattgcttctgtggtaggacaaagtgaggca
aaaaacctttggatgggaacttttcattccgtttttgcaagaattttacgttccgaagca
gataaacttggttttccaactaattttacaatttacgatacacaagattctgttaggtta
ataagtgccattattaaagaaatgggcttagacaaagaacgttataaggcaaaacagatt
ttgggaagaatctcttcatttaaaaacagtttaataaccgttagagcatattttaataat
tctgatttgcaagaagcagacatgcatgcaagcagaccaaaagtaggtgatatttataaa
gcatatgtagatagatgttttaaagctggcgcaatggattttgatgacttattgttaaga
accaatgagttgttagcacgttttccagaagttttagcaaaataccaagacagatttcga
tacataatggtagacgagtatcaagatacaaaccattctcaatacattattgttcgtgct
ttggcagataaattcggtaatatttgtgtggtaggagacgactcgcaaagtatttatagt
tttagaggagcaaatattcagaatattttaaattttcaaaaagattatccagaagttaaa
acatttaaattagagcaaaattatcgctctacaagtaatattgtaaatgcagcaaattct
gtaatcgaaaaaaataaaacaaagttagataaagaagtttggacgtctaatgatgccgga
gacgcaattaacgtaatgcgcacaatatccgacggagaagaaggtaggttcgttgcgcaa
tctatttgggaaaaccaaatgaatcatcagcttaaacctagcgatttttgcgttttatat
agaacaaactcacaatctagagcaatagaagacgccttacgtaaaaaaaatattgattat
aaaatttacggaggaatctctttttaccaaagaaaagagattaaagatattttatcttat
ttacgtattttaatcaatcctaatgatgaagaagccttaaaaagaattataaattatcct
gccagaggtattggtgcaacaacaatagacaaattaacaattgcagcaaatcattacaaa
aaatctattttcgatattataaaatatatagataaaatagatcttaaaataaatgctgga
acaaagaataagcttcagaattttatgaatatgatgctacgctttcaaatagaagctaaa
actaaaaatgcctttgaaattgcagaaactgttgtaaaacagacgcaattaattaaagat
ttagaaaaagatggcacaccagaagctgtaagtaaagtagaaaatgtacaagaactttta
aacggaattaaagattttattactgataaaattgaagaaggacaagacgcatctttaact
acttttttagaggatgttgcgttggctacagattttgattcagaaaaaaatgatgacaaa
ccaaccgtttctttaatgacaattcaccaatctaaaggattggaatatttgtatgtttat
gttgtaggattagaagaaaatttatttccgtctgcaatgagcatgaataccagaagcgag
ttagaagaagagcgcaggttgttttatgtagcattaactagagcagaaaaagtagcctat
ttaacgtatgctcaaactcgatacagatggggaaagttagtagatgcagaaccaagtagg
tttttagaagaaatagacgatcaatatttaaattacataacaccaaaaagtccgagtccg
gcagtaaataactttttagacaaaagtatttttgatgatgcgccaaaaggaattcgtttt
cagaaaccaattcaacgaaaaaaaatggagcgagatttagcaaagaaaaaagaaataaca
atacccaaaaacttaaaaaaagtttcaaatgtttctcctaaaatgaatctttttgatggt
gaaatatcaaaaggaaatattgtagaacacaatagatttggtaaaggaacagttataggt
atagaaggtaaaggacccgataaaaaagcagaaattcagtttgctaccgcaggtaaaaag
aaattactattacaatttgctaaattaaaagtgattgggtaa

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