Polaribacter sp. BM10: BXQ17_02775
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Entry
BXQ17_02775 CDS
T04746
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pola
Polaribacter sp. BM10
Brite
KEGG Orthology (KO) [BR:
pola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pola03009
]
BXQ17_02775
Enzymes [BR:
pola01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BXQ17_02775
Ribosome biogenesis [BR:
pola03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BXQ17_02775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
MTS
Methyltransf_25
PrmA
Methyltransf_32
Methyltransf_12
Cons_hypoth95
TRM5-TYW2_MTfase
N6_N4_Mtase
FtsJ
Methyltransf_15
Methyltransf_11
UPF0020
Ubie_methyltran
mRNA_G-N7_MeTrfase
PCMT
TRM
DOT1
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
AQS93063
LinkDB
All DBs
Position
complement(657427..658878)
Genome browser
AA seq
483 aa
AA seq
DB search
MPRRERNKFVKKNQVLELKIEDYAFGGKGIARIHSEEGSFVIFVPNTLPGQLVKAQISKS
SKKYAEAKLIDVLQPSEDEVAVPYQDIPGAPYIQLPIDLQHKYKQESTLSLFKRIGKVEN
IEDLFDEFVKSPNVFHYRNKMEYGFSAIGYDRINKTDKDEFTLGFKRRGVWWMGDNLEKD
SGLFDKQLEDNLNNIREYCKATGLEPWHGPRKTGFFRYFVVRKSFKTDELLCNLVTTSPE
LENFDLDKFANFLKDIFGDRLAGLLHTINDETGDRTIATAGKLDLVYGKDKIVEELLGLN
FEISMKSFFQTNPKCAEKLYSKVVEYVLEDKDKVDNTVVMDLFCGTGTIGQIVASKSENA
KIVGVDIVASAIEDAKKNAKRNNIEGLQFYAADVGKFLIAHPEYQNKIKTIILDPARAGI
APKTLKKIINLNADRMVYVSCNPATQARDTELLREAGYAIKKISLVDQFPHTSHIETVVL
FEK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtagagaacgaaacaagtttgtaaaaaaaaatcaggttttagaattaaaaatt
gaagattatgcttttggcggaaaaggtattgctagaatccattccgaagaaggtagtttc
gtaatttttgttccaaatacattacctggtcagttggtaaaagcgcaaataagtaagtct
agtaaaaaatacgcagaagcaaaattaatagacgttttacaaccatcagaagatgaagtt
gcagttccgtatcaagacatacctggtgcaccttacattcaattaccaatagatttacag
cataaatacaaacaagaaagtacactttctctatttaaaagaattggtaaagtagaaaat
atagaagatttatttgacgaatttgtaaaatctccaaacgtatttcattacagaaataaa
atggaatatggtttttctgcaattggatacgatagaattaataaaacagataaagacgag
tttacactaggttttaaaagacgtggtgtttggtggatgggtgataatctagaaaaagat
tctggtttatttgacaaacaattagaagacaatctaaataacattagagaatattgtaaa
gcaacaggtttagaaccttggcacggtcctagaaaaactggtttttttagatattttgta
gtaagaaaatcttttaaaacagacgagttattgtgcaatttagtgactacatcgccagaa
ttagaaaattttgatttagataaatttgcaaactttttaaaagatattttcggagatcgt
ttagcaggtttattacatacaattaatgatgaaactggcgatagaacaatagcaaccgca
ggtaaattagaccttgtgtatggtaaagataaaattgtagaagaattattagggttaaat
ttcgagattagcatgaaaagcttttttcaaaccaacccaaaatgtgcagaaaaattatac
tctaaagttgtagagtacgttttagaagataaagacaaagtagacaatactgttgtaatg
gatttattttgtggtacaggtacaataggtcaaattgttgcttctaaaagcgaaaacgca
aaaattgttggtgtagacattgttgcttctgccatagaagatgcaaagaaaaatgcaaaa
agaaataatattgaaggtttacaattttatgcagcagatgttggtaaatttttaattgcg
catccagaatatcaaaataaaattaaaacgattattttagatcctgcaagagctggtata
gcaccaaaaacgcttaaaaaaattatcaatctaaatgcagatagaatggtatatgtttct
tgtaatccagcaacgcaagcaagagacacagaattattaagagaagctggttatgcaatt
aaaaaaattagtttggtagatcaatttccgcacacaagtcatatagaaactgttgtttta
tttgaaaaataa
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