Polaribacter sp. BM10: BXQ17_03765
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Entry
BXQ17_03765 CDS
T04746
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pola
Polaribacter sp. BM10
Pathway
pola03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BXQ17_03765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pola03019
]
BXQ17_03765
03400 DNA repair and recombination proteins [BR:
pola03400
]
BXQ17_03765
Enzymes [BR:
pola01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BXQ17_03765
Messenger RNA biogenesis [BR:
pola03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BXQ17_03765
DNA repair and recombination proteins [BR:
pola03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BXQ17_03765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
Hanta_Gn-B
Motif
Other DBs
NCBI-ProteinID:
AQS93246
LinkDB
All DBs
Position
complement(868024..870207)
Genome browser
AA seq
727 aa
AA seq
DB search
MDLHSPLKKFFGFNKFKGLQEQVVNSIVNGNNTFVIMPTGGGKSLCYQLPALMQEGTAIV
VSPLIALMKNQVDAIRGISENNGVAHVLNSSLNKTEIAKVKDDISNGVTKLLYVAPESLI
KEEYVLFLRTQKISFVAIDEAHCISEWGHDFRPEYRNLKHIIKAIDNVPVICLTATATEK
VQEDILKTLGITDANRFKASFNRPNLFYEVRPKTKEVEKDIIRFVKQRIGKSGIIYCLSR
KKVEEVAQILQVNGLNAVPYHAGLDAKTRAKHQDMFLMEDCDIVVATIAFGMGIDKPDVR
FVIHHDIPKSLESYYQETGRAGRDDGEGYCLAFYSYKDIEKLEKFMSSKPVAEQEIGHAL
LQEVVGYAETSMNRRKYLLHYFGEDFDEINGEGADMDDNSRNPKKKHEAKEDVIKLLSVV
KNTMQKYKSKEVVNTLIGKENALLTSHKTHLQPFFGIGKEKKAAYWMALVRQVLVVNFIK
KEIEQYGVVKLTKKGESFLEKPVSFMMTEDHSYSEENDNTIITNAKSAGAATDATLVKLL
KDLRKKVANKQGVPPFAVFQDPSLDDMALKYPINLEELSTVHGVGEGKARKFGKEFVALI
SNYVTENEILRPDDLIVKSTGTNSGIKLYIIQNTDRKLPLEDISKSKGLEMTELIKEMEA
IIFSGTKLDINYALDDVLDEDQQEEIYDYFMEAETDKIQEALDEFDGDYDEDELRLMRIK
FINEVGN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggatttacatagccctctaaaaaagttctttggattcaataaatttaaaggcttacaa
gagcaagttgttaatagtattgtaaatggtaataatacttttgttattatgccaacagga
ggtggtaaatctctatgttatcaactacctgcattaatgcaagaaggtacagcaattgta
gtttctccgttaattgctttaatgaaaaatcaagtagatgccattagaggtatttcagaa
aataatggtgttgcccatgtattaaattcttctcttaacaaaacagaaatagcaaaagtt
aaagacgatatttctaacggagttacaaaacttttatacgtagcaccagaatctttaatt
aaagaagagtatgttttattcttaagaactcaaaaaatttcttttgtagcaatagatgaa
gcgcattgtatttctgaatgggggcacgattttagacctgaatacagaaatttaaagcac
ataattaaagctatagataatgtacctgttatttgtttaactgctacagctactgaaaaa
gtacaagaagacattttaaaaactttgggtataacagatgccaatagatttaaagcttct
tttaatagaccaaacttattttacgaggttaggccaaaaaccaaagaagtagaaaaagat
attattcgttttgtaaaacaaagaattggcaaatctggtattatatattgtttaagtaga
aaaaaggtagaagaagtagctcaaatattacaagttaatggtttaaatgctgttccttat
catgctggtttagatgcaaaaacaagagcaaaacatcaagatatgtttttgatggaagat
tgtgatattgtggttgctaccatagcttttggaatgggaattgacaagccagatgttcga
tttgttatacaccacgatattcctaaaagtttagaaagctattaccaagaaactggtaga
gcaggtagagatgatggtgaaggttattgtttggctttttattcttataaagacatagaa
aagttagaaaaatttatgtctagtaaaccagtagcagaacaagaaattggtcatgctttg
ttacaagaagttgtaggttatgccgaaacttctatgaatagacgtaaatatttattacat
tattttggtgaagattttgatgaaataaacggtgaaggagccgatatggatgataattct
agaaatccgaagaaaaaacacgaagcaaaagaagatgtaattaaactgttatcagttgtt
aaaaatacaatgcaaaaatacaaatctaaagaagttgtaaatactttaataggtaaagaa
aatgcattattaacttctcataaaacacatttacaaccattttttggaattggtaaagag
aaaaaagcagcttattggatggctttggttagacaagttttagttgtaaactttatcaaa
aaagaaatagaacaatacggagtcgtaaaattaactaaaaaaggagaaagctttttagaa
aaaccagtttcttttatgatgacagaagatcattcttattctgaagaaaatgacaataca
ataattacaaatgctaagtctgctggtgctgcaacagatgctacattggttaaactctta
aaagatttacgtaaaaaagtagctaataaacaaggtgttcctccgtttgctgtttttcaa
gatccgtcattagatgatatggctctaaaatatcctattaatttagaagagctttctaca
gttcacggagtaggagaaggtaaagcaagaaaatttggtaaagaatttgtagcattaatt
tctaactatgttacagaaaatgaaattttaagaccagacgatttaattgtaaaaagtaca
ggtacaaattctggaataaagttatatatcattcagaatacagatagaaaacttccttta
gaagatatttcgaaatcgaaaggtctagaaatgacagaactaatcaaagaaatggaagca
attattttttctggtacaaagctagatattaattatgctttagatgatgttctagatgaa
gaccaacaagaagaaatctatgattatttcatggaagcagaaactgataaaatacaagaa
gctttagatgaatttgatggtgactatgatgaggatgaattacgtttaatgcgtattaaa
tttataaatgaagtaggtaattaa
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