Polaribacter sp. BM10: BXQ17_04200
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Entry
BXQ17_04200 CDS
T04746
Name
(GenBank) DNA recombination protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pola
Polaribacter sp. BM10
Pathway
pola03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BXQ17_04200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pola03400
]
BXQ17_04200
DNA repair and recombination proteins [BR:
pola03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BXQ17_04200
SSDB
Ortholog
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GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA_27
MukB
DUF8309
DUF2813
RsgA_GTPase
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
AQS93329
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Position
complement(959896..960975)
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AA seq
359 aa
AA seq
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MYLQKLSLVNFKNIESQSFDFQQKINCFVGNNGVGKTNVLDAIYYLSFAKSYFNSVATQN
IRHGESFFMIEGDYNLNDRSEKIVCSLKKGQKKVLKRNGKNYDKFSEHIGQLPLVIISPA
DRDLVTEGSDTRRKFIDGVISQQNKSYLKDLIAYNKILSQRNALLKYFAANRTFDALNLN
VYDEQLCEYGTRIYEVRKAFLEKFIPIFNEKYQIISDDKEHVNLVYKSQLQDFSLKELFQ
KSLDKDKIIQYTTSGIHKDDLSFEIGNYPIKKFGSQGQQKSYLIALKFAQFEFIKQQASV
TPILLLDDIFDKLDESRVLQIINLVNNDEFGQIFITDTHSERTENIVKQSNKPYQIFKL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtatttacaaaaactttctttagttaattttaaaaatatcgaatcgcaatcttttgat
tttcagcaaaaaataaattgttttgttggtaataatggcgttggtaaaacaaatgtttta
gatgctatttattatttgtcttttgcaaaaagttactttaattctgtcgcaacacagaat
attagacacggagaatctttttttatgatcgaaggagattacaatttaaacgacagaagt
gaaaagattgtatgtagtttaaaaaaaggtcaaaagaaggttttaaagagaaatggtaaa
aactacgacaagttttctgaacatatcggtcaattacctttagtaataatttcacctgcc
gatagagatttagtaacagaaggtagtgatacaagaagaaaatttatagatggtgttatt
tcgcagcaaaataaaagttatttaaaagacctaattgcatataataaaatattgagtcaa
agaaacgctttgttaaagtattttgcggctaatagaacttttgatgcattaaatttaaat
gtatatgatgagcaattatgtgaatacggtacaagaatttatgaggttagaaaagctttt
ttagaaaaatttattcctatttttaatgagaaatatcaaataatttctgatgataaagaa
catgtaaacttggtttataaaagtcagttacaagatttttctttaaaagaattatttcag
aaatctttagataaagataaaataatacagtatactacatctggtatacataaagacgat
ttaagtttcgagataggaaattatcctattaaaaaatttggctcacaagggcaacaaaag
tcttatttaatcgctttaaaatttgcgcagttcgagtttataaagcaacaagctagcgta
acacctattttattgttagatgatatttttgataaattagatgaaagtagagtgttgcaa
attatcaatttagttaataatgatgaatttggacaaatttttataacagatacacattct
gaaagaacagaaaacatcgtaaaacaaagtaataaaccttatcaaatatttaaattataa
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