Polaribacter sp. BM10: BXQ17_08570
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Entry
BXQ17_08570 CDS
T04746
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
pola
Polaribacter sp. BM10
Pathway
pola02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pola00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BXQ17_08570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pola03021
]
BXQ17_08570
Transcription machinery [BR:
pola03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BXQ17_08570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
RBD_LARS1
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AQS94115
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All DBs
Position
1908414..1909277
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AA seq
287 aa
AA seq
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MRQLKIVKQVTNRDAKSLEKYFQEISKIGLITADEEVELALKIKTGDSIALDKLVKANLR
FVVSVAKQYQGQGLKLSDLINEGNLGLVKAAKRFDETRGFKFISYAVWWIRQSIMQALAE
QSRIVRLPLNKIGSISKINKIYARLEQNEQRMPTNKEIAQSLDMTETEVEQSIRNSGKSL
SMDAPFKDGEDSNLYNVLQSDESPKPDKDLMNQSLKIEIDRALNTLTSKEAKVLKMYYGI
GNEVATSLTEIGEKFDLTRERVRQVKQRAIRRLQSKSKNQMLKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaattgtaaagcaagtaaccaacagagacgcaaaatctttagaaaaa
tattttcaagaaataagtaaaataggtttaataactgcagacgaagaagtagaattggct
ctaaaaattaaaacaggagattcaattgcgttagataaattggtaaaagctaatttaagg
tttgtagtatctgtagctaagcaatatcaagggcaaggtttaaaactatcagacttaata
aacgaaggtaatttaggtttagtaaaagctgcaaaacgttttgatgaaacaagaggtttt
aaatttatttcttatgctgtttggtggattcgtcaatctataatgcaagctttagcagaa
caatctagaattgtaagattaccattaaataaaattggtagcattagtaaaatcaataaa
atttacgctagactagagcaaaatgaacaacgaatgcctacaaataaagaaattgcacaa
agtttagacatgacagaaacagaagtagaacaatctattagaaattctggtaaatcttta
tctatggatgcaccttttaaagacggagaagattctaatttatacaatgttttacagtct
gatgaatctcctaaaccagataaagatttaatgaaccagtctttgaaaatagaaatcgat
cgagctttaaacactttaacatctaaagaagctaaagttttaaaaatgtattacggtatt
ggtaatgaagttgctacaagtttaactgaaattggcgaaaaattcgatttaactagagaa
agagtaagacaagtaaaacaaagagcaataagacgattgcaatctaaatctaaaaatcaa
atgctaaaaacatacttaggataa
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