Polaribacter sp. BM10: BXQ17_13375
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Entry
BXQ17_13375 CDS
T04746
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pola
Polaribacter sp. BM10
Pathway
pola03030
DNA replication
pola03430
Mismatch repair
pola03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BXQ17_13375
03430 Mismatch repair
BXQ17_13375
03440 Homologous recombination
BXQ17_13375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pola03032
]
BXQ17_13375
03400 DNA repair and recombination proteins [BR:
pola03400
]
BXQ17_13375
Enzymes [BR:
pola01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BXQ17_13375
DNA replication proteins [BR:
pola03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BXQ17_13375
DNA repair and recombination proteins [BR:
pola03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BXQ17_13375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
Menorin
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
AQS95012
LinkDB
All DBs
Position
complement(3058384..3062724)
Genome browser
AA seq
1446 aa
AA seq
DB search
MYLIFDTETTGLPKSWNAPITDTDNWPRCIQIAWQLHDKMGNVLEHNDFLIQPDGFNIPY
DAERIHGISTELAEEQGIKLEKGLKLFNEALKKTKFIVGQNVGFDINIMGCEFHRLGVEN
NLTSLPLLDTCTEKTATMCQIPGGRGGKFKLPTLTELHNHLFGVGFGEAHNATADVEATT
RCFLELIRLREFTQEELDVDADYFKNFSEANPKPIQVIGLKHINLKQESDKIRKRLEKLK
GVSETKSTSEGLAELKDVQFSHLHNHTQYSVLQSTMQLGNIVKAAAKYNMPAVAMTDTAN
MMGAFHFVNAVLSHNKNAETPMKPIIGCEFNICEDHKNKSQKDNGYQVVLLAKNKNGYHN
LAKMSSAAFVDGFYYVPRIDKALVEKYKEDIIVLTGNLYGEVPSKILNLGEKQAEEALLW
WKEQFKDDFYIELMRHDQQDEKIVNETLLKFSKKHNIKVVATNNTFYLDKKDANAHDILL
CVKDGEKQATPIGKGRGYRYGLPNQEYYFKSSDEMKKLFADLPEAIINIQEIVDKIEIYT
LARDVLLPAFDIPEEFLSEEDKIDGGKRGENAFLKHLTFEGAKKRYGEITESIKERLDFE
LEVIEKTGYPGYFLIVEDFIREARNMDVAVGPGRGSAAGSVVAYCLWITNIDPIKYDLLF
ERFLNPERVSMPDIDIDFDDEGRGRVMDYVIDKYGANQVAQIITYGTMAAKSSIRDTARV
LDLPLFEADRIAKLIPGIKLKNIFGDDPKSKGKVDGLRAEEKQLVEELRSLSYGTDLASE
TINKATILEGSVRNTGIHACGVIITPGDITNYVPVSLAKDSDMYVTQFDNSVVENAGLLK
MDFLGLKTLTLIKDTVKIVKARHGVELDPENFSLDDVKTYELFQRGETVGVFQYESPGMQ
KHMRSLKPTVFADLIAMNALYRPGPMEYIPSFINRKHGTEDIEYDLPAMEEYLAETYGIT
VYQEQVMLLSQKLADFTKGEADVLRKAMGKKQIAVLDKMKPKFVEQAAANGHDPEKLEKI
WKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMASVLSNNMNDIKSVSFFMEEC
KRMGLEVLGPDLNESYLKFSVNKEGAVRFGMAAVKGVGASAVRAIIKEREENGNYTSIFD
LAKRVDLRAANKKSFDSLIKAGAFDSFTDTHRAQYFDTDEKGQTFLERAMKFGSKYQENE
NSAQVSMFGEASTVQFPEPDIPQCETWGTMELLSQEKEVIGIYISAHPLDDFKNELKFCN
ASLKHFKGDLAKYVGMNMAFAGIITDVQHRVSKAGKGWAAFTIEDYGDSHEFRIFGEDYL
KMKHFLVPNSFLFVRSTIQPGWTNKETGVAGEPRLKFTEMKLLHDIMDELCKKVTIQLPL
SDIKEDTILNLESILKNKPGKQNLNFTIWDEKEKLEISLPSRNTKLHITNELLATLEKQQ
IKYKLN
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatttttgatacagaaactactggtttaccaaaaagctggaacgcaccaatt
accgatacagacaattggccaaggtgtattcaaattgcatggcaattgcatgacaaaatg
ggaaatgtgctagaacacaacgattttcttattcagccagatggttttaatattccgtat
gatgcagaaagaattcacggtatttctactgaattggcagaagaacaaggtatcaaatta
gaaaaaggtttaaaactttttaacgaagctttaaaaaaaacaaaatttattgtaggtcaa
aatgttggttttgatattaatattatgggatgtgaatttcatagattaggtgtagaaaat
aacttaacctctttacctcttttagatacttgtacagaaaaaacagctaccatgtgtcaa
attcctggtggtcgaggtggtaaatttaaattaccaacattaacagaattgcacaatcat
ttatttggcgttggttttggtgaagctcacaatgcaactgccgatgtagaggcaacaaca
cgttgttttttagagttgattcgtttaagagaatttacacaagaagaattagatgtagat
gcagattattttaagaatttctctgaagcaaatccgaaaccaattcaagttattggttta
aaacacatcaatctaaaacaagaaagcgataagattcgtaagcgtttagaaaaattaaaa
ggagtttcagaaactaaatctacatcagaaggtttagccgagttaaaagatgtacaattt
tctcatttacacaaccacacacaatattctgttttacaaagtaccatgcaattgggtaac
attgtaaaagctgcagcaaaatataacatgccggcagttgctatgacagatactgcaaac
atgatgggtgctttccattttgtaaacgcagttttaagtcataataaaaatgccgaaact
cctatgaaaccaattattggttgcgagtttaacatttgtgaagaccataaaaacaaatca
caaaaagacaacggatatcaagtagttttattagcaaaaaataaaaacggatatcataat
ttggctaaaatgtcttctgcagcctttgtagatggtttttattatgtaccaagaatagac
aaagctttagtagaaaaatataaggaagatattattgttttaaccggaaatttatacggt
gaagttcctagtaagattttaaatttaggtgaaaaacaagcagaagaagctttactttgg
tggaaagaacaatttaaagacgatttttatatcgaattaatgcgtcatgatcaacaagac
gaaaaaattgttaatgaaactttacttaaattttctaaaaaacataacataaaagtagtt
gctacaaacaatactttttatttagataaaaaagatgcaaatgctcacgatattttattg
tgtgtaaaagacggagaaaaacaagctacacctattggtaaaggtcgtggttatagatat
ggtttacctaatcaagagtattatttcaaatcttctgatgaaatgaaaaaactctttgca
gatttaccagaagccattatcaacattcaagaaattgtagataaaatagaaatatatacg
cttgctagagacgttttattacctgcttttgatattccagaagaatttttatccgaagaa
gataaaatcgacggaggaaaacgtggagaaaatgcttttttaaaacacctaacttttgaa
ggtgccaaaaaacgttatggagaaattacagaatctatcaaagaaagattagattttgaa
ttggaagtaattgaaaaaacaggatatcctggttattttttaattgtagaagattttatt
agagaagcccgaaatatggatgttgcagtaggtcctggacgtggttctgccgcaggttct
gtagttgcatattgtctttggattacaaatatagatcctattaaatatgatttacttttc
gagcgtttcttaaatccagaacgtgtttcgatgcccgatattgatattgattttgatgat
gaaggtcgtggtcgtgtaatggattatgtaattgacaaatacggcgcaaaccaagttgct
caaattattacttacggaacaatggctgcaaaatcttctattagagatacggccagagtt
ttagatttaccgctgtttgaagccgatagaattgcaaaattaattccaggaataaaatta
aaaaatatttttggtgacgatcctaaaagcaaaggaaaagttgatggtttaagagctgaa
gagaaacaacttgtagaagaattaagaagtctttcttatggtactgatttagcatcagaa
acaataaataaagcaacaatattagaaggttctgttagaaatactggtatacatgcatgt
ggtgtaattattacacctggtgatattactaattatgttccggtttctttggctaaagat
tccgacatgtatgttacccaatttgacaactctgtggtagaaaatgcaggtttgttaaaa
atggatttcttaggattaaaaacgcttactttaattaaagacaccgttaaaattgtaaaa
gctagacatggcgtagagttagatccagaaaacttttctttagatgatgtaaaaacatac
gaattgtttcaaagaggagaaactgttggtgtttttcaatatgaatctcccggcatgcaa
aaacacatgcgttctttaaaaccaacggtttttgcagatttaattgcaatgaatgctttg
tatcgtcctggaccaatggaatacattccgagttttatcaacagaaaacacggaactgaa
gatattgagtacgatttacctgctatggaagaatatttggcagaaacgtatggaattaca
gtttaccaagagcaagtaatgcttttatcgcaaaaattagcagattttaccaaaggtgaa
gccgatgttttacgtaaagcaatgggtaaaaagcaaattgcggttctagataaaatgaaa
cctaaatttgtagaacaagctgctgcaaatggtcatgatcctgaaaaactagaaaaaatc
tggaaagattgggaggcatttgcaagttatgcttttaacaaatcgcattctacttgttat
gcttggatcgcttaccaaacagcatatttaaaagcgcattatcctgcagaatatatggct
tctgtactttctaacaacatgaacgacataaaatctgtatcgttttttatggaagaatgt
aaacgaatgggcttagaagttttaggaccagatttaaatgaatcttatttaaaattttct
gtaaataaagaaggtgctgtacgttttggtatggctgccgtaaaaggtgttggcgcaagt
gccgtgagagcaattattaaagaaagagaagaaaacggtaattatacttctattttcgac
ttagcgaaacgtgtagatttaagagccgcaaataaaaaatctttcgatagtttaattaaa
gcaggtgcattcgattcttttacagatacacacagagctcaatattttgatacagacgaa
aaaggacaaacgtttttagaacgcgctatgaagtttggtagtaaatatcaagaaaatgaa
aattctgcacaagtttctatgtttggtgaagcttctacggttcagtttccagaaccagat
attccgcaatgtgaaacttggggaactatggaattactttcgcaagaaaaggaagttatc
ggtatttatatttctgcgcatcctttagatgattttaaaaatgaacttaaattttgtaac
gcttctttaaaacattttaaaggtgatcttgcaaaatatgttggtatgaacatggctttt
gctggtattattactgatgtacaacacagagtttctaaagctggaaaaggttgggcagct
tttacaatagaagattatggtgatagtcacgaatttagaatttttggtgaagattactta
aaaatgaaacatttcttagtaccaaattcatttttatttgtaagatctaccatacaacct
ggttggacgaacaaggaaacaggtgttgctggtgaaccacgattaaagtttacagaaatg
aaattacttcacgacattatggatgaactttgtaaaaaagtaactattcaattaccgtta
agtgacattaaagaggatactattttaaatttagaatctattctaaaaaacaaaccaggt
aaacaaaacttaaactttacaatttgggacgaaaaagaaaaattagaaatcagtttgcca
agtagaaatacaaaactacatattactaatgagttattagcaactttagaaaaacaacaa
attaagtataaattgaattag
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