Polynucleobacter sp. KF022: PKF022_02070
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Entry
PKF022_02070 CDS
T10441
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
polk Polynucleobacter sp. KF022
Pathway
polk02024
Quorum sensing
polk03060
Protein export
polk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PKF022_02070 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PKF022_02070 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PKF022_02070 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
polk02044
]
PKF022_02070 (ffh)
Enzymes [BR:
polk01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PKF022_02070 (ffh)
Secretion system [BR:
polk02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PKF022_02070 (ffh)
Eukaryotic Sec-SRP protein
PKF022_02070 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
AAA_31
T2SSE
cobW
YqeC
AAA_16
nSTAND3
ATP_bind_1
AAA_14
Helicase_RecD
AAA_30
Thymidylate_kin
AAA_33
AAA_19
APS_kinase
Rad17
KTI12
TsaE
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
BDT74542
LinkDB
All DBs
Position
complement(201279..202661)
Genome browser
AA seq
460 aa
AA seq
DB search
MLENLTDRLSRVVKTMRGQARLTEANTAEMLREIRLALLEADVALPVVKSLLEQIKFKAL
GEEVVGSLSPGQALVGVVQRELAQVMRGDTNQRGELNLATQPPAVILMAGLQGAGKTTSV
GKLAKWLQEKKKKKVLTVSCDVYRPAAIEQLETVTKQVGAEFFPSNISQKPNDIALAALD
WARRHYFDVVLVDTAGRLGIDEALMQEIKTLHASLNPIETLFVVDAMLGQDAVNTAKAFH
EALPLTGVILTKLDGDSRGGAALSVRQVTGVPLKFIGVAEKMDGLEAFDAERMANRILGM
GDILALVEQAQQHVDVAKAEKLASKISKGGFDLEDFRDQLMQMQKMGGMASLMDKLPSQM
AQAASKTNLSNADKQTTRMRGIIDSMTPQERRKPELLKASRKRRIAAGSGVEVQEINRLL
AQFEQMQTMMKQFKGGKMARTMASMAAKGAAKGISGLFKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctagaaaacctcaccgaccgcctatctcgcgttgttaaaacaatgcggggtcaagcc
cgcctcactgaagccaataccgctgaaatgctgcgggaaatccgtttagccctattagag
gctgacgtagcactgcctgtagtgaagtctttgcttgagcaaattaaatttaaagccctt
ggcgaggaagtggttggcagcctgagtcctggtcaagcattggttggcgtagtccaacgc
gagctagcccaagtaatgaggggcgataccaatcaaagaggcgaactcaatttagcaacc
cagccacctgcagtgatattgatggcgggtttacaaggtgcgggcaaaacgacctctgta
gggaaactggcaaagtggttgcaagagaaaaagaagaagaaagttctcacggtttcttgt
gacgtctatcgtccagcagcgattgagcaattagaaaccgttaccaaacaagttggcgct
gagtttttcccaagcaacattagtcaaaaaccaaatgacatcgcgcttgccgcacttgac
tgggcaaggcgccattacttcgacgtagtgctggtggataccgcaggtcgccttggtatt
gatgaggcgctgatgcaagaaatcaaaaccttgcatgccagcctcaacccaattgaaacc
ttatttgtagtagatgcaatgctcggccaagatgcggtcaatactgccaaggccttccac
gaagcgctgccattaaccggcgtgattctcacgaagttagatggtgactctcgtggcggc
gcagcactctccgttcgccaagtaaccggtgtaccgctcaaatttattggtgtcgccgaa
aagatggatggcctagaggcgtttgatgcagaacgcatggctaaccgaatcttgggtatg
ggcgatattctggccctggtcgagcaagctcaacagcacgttgacgttgctaaagcagaa
aaattagccagcaagatttctaaaggtggttttgatcttgaagacttccgcgatcagtta
atgcaaatgcaaaagatgggtggcatggccagcctgatggataaattgccaagtcagatg
gcgcaagccgcctctaaaactaatttaagtaatgccgataaacaaaccacgcgcatgcgt
ggaattattgacagcatgacccctcaagaacgcagaaagccagaactgctcaaagctagt
cgcaaacgtcgtattgctgcaggctccggtgtggaagttcaagaaattaatcgcctgctt
gctcagtttgagcaaatgcaaaccatgatgaagcaatttaaaggtggaaaaatggcgcgc
accatggcaagcatggctgcaaaaggagccgccaagggtattagcggactcttcaaaaaa
taa
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