Polynucleobacter sp. KF022: PKF022_02210
Help
Entry
PKF022_02210 CDS
T10441
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
polk Polynucleobacter sp. KF022
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
polk03016
]
PKF022_02210
Enzymes [BR:
polk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PKF022_02210
Transfer RNA biogenesis [BR:
polk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PKF022_02210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
BDT74556
LinkDB
All DBs
Position
217578..219623
Genome browser
AA seq
681 aa
AA seq
DB search
MNLLYEEGGDIKIATVQSASGAGDAESWQATSLSGKKIKLKAKEVWLRFEKPEAQAAIDE
ANTLSADIDLQLLWDCAPDEEFGLVDVAQEYFGSQVSVPQQVALAIALQGAPVFFRRKGR
GRFQRAPLEQLQAGLAALERKQKELEQQSVWQRELVDGTFPETLKSSAKQLLFSPDKNTS
AYKALIAACTETGESPAQLMIRCGAIDSPLAYHQGMFLKAHFPNGANHNPAIGVDQAAYA
SAIAELPVAQVQAFSIDDSGTTEIDDALSVTPIEGGHRVGIHIAAPGLAITKDDPLDQVA
RNRMSTVYFPGDKITMLPDSVIEQFSLDEGMPRPALSIYVDIDAQGVVNRETLQMRSEMV
PMAANLRLEDIEHLVSEESLADESASYPYRKELAILWRAAKHLHAGRQEKRVANGLRAEQ
LGLIDPNALARDFHFLIQEVDGVQRVDILPRQRGSILDTIVAEWMIFCNSASGQLLADHG
LPGLFRTQKGWGPLRTRMQTTPGPHEGLGLDYYAWCTSPLRRYSDLVNQWQLIALAKHGV
AAKMVAPFPPRDATLMGIAADFESCYQAYGEFQDRLEKYWCLRWVVQDGESKTVHVRHLK
EGMSRLELVPLHLPIPELATHPRMIRAEVVIADVDLLQLSAGVRVLEIEAKAESPEKESA
DQAADSGSGASDNLEEDASPN
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttatatgaagagggtggcgatattaagatcgctacagttcagtctgcatct
ggtgcgggagatgcagagtcttggcaggctaccagcctttcaggtaaaaaaatcaaactc
aaagccaaagaggtatggctgcgctttgaaaagccagaagcacaagctgctatagatgag
gccaacacactcagtgccgatattgatttgcagttactttgggattgtgcgcctgatgaa
gagtttggtttggtagatgtggctcaggagtactttggatcacaagttagtgtgccgcag
caagtggcattagccattgctttgcagggagcccccgttttctttcgtcgcaaaggacgt
ggccgctttcagagggcgccactagagcagctgcaggctggactggccgctttagagcgt
aagcaaaaagagcttgagcagcaatcggtctggcagcgggaactggttgatggaactttc
cctgaaacgctcaagtcttcagccaagcaattacttttttctcccgataaaaatacgtct
gcgtacaaggcgcttattgctgcttgtaccgagaccggtgaatctccagctcaattgatg
attcgttgtggcgcaattgattcacccttggcttatcaccagggaatgtttcttaaagcg
cattttccaaatggtgcgaatcacaatccagctattggggttgatcaagcagcatatgca
tctgctatagctgagctgccagtcgctcaagtgcaggcattttcaatcgatgattccggt
accactgagattgatgatgctctatcagtcacgccaattgagggcggtcatagggtgggc
attcatattgcggctccaggattagcgattactaaagatgacccattggatcaagtcgct
cgcaatcgaatgtcaacagtgtatttccctggcgacaaaattacgatgttgcctgattcg
gtcattgagcaattctcattggatgagggcatgccaagacctgctttatcaatctatgta
gatattgatgctcaaggagtggtgaatcgcgagaccttgcagatgcgatctgaaatggtc
ccaatggcagctaatttacgcttagaggatatcgagcatcttgtgagtgaagaaagtttg
gcggatgagtctgcaagctatccttatcgcaaagaattagctatcttgtggcgggctgct
aagcatcttcatgctggacgccaagaaaagcgagtagcaaatggtttgcgggctgaacaa
ttagggcttattgaccccaatgctttagctagagattttcatttcctaatccaagaagtg
gatggagttcagcgtgtagatatcctaccgcgtcaacgtgggtctattttggacactatt
gttgctgaatggatgattttctgtaacagcgcttctggtcagcttctggcagatcacggt
cttcctggcttatttagaacccagaagggttggggtccattgcgtactcgcatgcagacc
actcctggaccgcatgaaggattgggcctggactattacgcttggtgtacttcgcctttg
cgccggtattctgatttagtcaatcaatggcaattaattgcacttgcgaagcatggcgtc
gccgccaaaatggttgcgccatttccgccgcgtgatgcaaccctgatgggaattgcggct
gacttcgaatcttgttaccaggcttatggtgagttccaggaccgactagagaaatattgg
tgtttgcgttgggttgtgcaagacggcgaatcaaagacagtgcatgttcgtcatttgaag
gagggtatgtctcgcctggagttggtgccactgcacttgcctattcctgaattagcaacc
cacccccgcatgattcgagcagaagtggtcattgctgacgtagatttattgcaactgagc
gcaggcgttcgtgttttagagattgaagcaaaggcagaatcccctgaaaaggaatcggct
gaccaggccgcagattctgggtcaggagcatcagacaatttagaagaagatgctagccca
aattaa
DBGET
integrated database retrieval system
