Polynucleobacter sp. KF022: PKF022_02930
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Entry
PKF022_02930 CDS
T10441
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
polk Polynucleobacter sp. KF022
Pathway
polk00541
Biosynthesis of various nucleotide sugars
polk01100
Metabolic pathways
polk01250
Biosynthesis of nucleotide sugars
Module
polk_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PKF022_02930 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
polk01005
]
PKF022_02930 (kdsB)
Enzymes [BR:
polk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
PKF022_02930 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
polk01005
]
Lipid A
PKF022_02930 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
BDT74628
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Position
complement(283506..284270)
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AA seq
254 aa
AA seq
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MTASIKSPDFLVVIPARLGSTRLPRKPLADIGGKPMVIRVAERAKLSLAQSVVVATDSPE
IQAVCDEHRIDCLLTSENHPTGTDRIAEVAQLLKLPNDALIVNVQGDEPLIPPELINQVA
STLAEKARCAISTVAVPITEVAEINNPNVVKVVLNRSGEALYFSRAPIPFVRDAQAQQTT
THLRHLGIYGYRADFLQAYSRLEPAPPEQAEALEQLRALWNGYRIAVHIAPEAPPAGVDT
PEDLERIRQLLGNT
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctccatcaaatctccagattttttagtagtgattccggcaagactaggatca
acccgcttacctcgtaaaccgttagccgatattggcggcaagccaatggtgatccgagtg
gcggaacgtgccaagctttctcttgcgcaaagtgttgtagtcgccactgactccccagaa
attcaagcagtttgcgatgaacatcgcatagattgcttactcactagcgaaaatcatcca
accggtaccgatcgcattgcagaagttgcgcaattactgaagctgcctaatgatgcatta
attgtgaatgttcaaggtgatgaaccactcataccgccagaactgattaaccaagttgcc
agcactctagctgagaaggcacgctgcgccatctctactgttgccgtaccgattactgaa
gttgcagaaattaacaatcccaatgtagtgaaagttgtgctcaatcgctcaggtgaagcg
ctgtacttttcaagagcgcccattccttttgtcagggatgctcaagcgcagcaaactacc
acacatttacgccaccttggaatttatggttaccgggctgacttcttgcaagcttatagc
cgcctagagccagcacccccagagcaggcggaggccttggaacagctgcgcgccctctgg
aatggataccgtattgcggtgcatattgctccagaggcacctccagcaggggttgatacc
cccgaagacctcgagcgcatcagacaattgctaggcaatacctag
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