Polynucleobacter sp. KF022: PKF022_02980
Help
Entry
PKF022_02980 CDS
T10441
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
polk Polynucleobacter sp. KF022
Pathway
polk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PKF022_02980 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
polk03400
]
PKF022_02980 (xseA)
Enzymes [BR:
polk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PKF022_02980 (xseA)
DNA repair and recombination proteins [BR:
polk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PKF022_02980 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
HrpF
UIM
VMAP-M1
WASH_WAHD
DUF1508
KxDL
Motif
Other DBs
NCBI-ProteinID:
BDT74633
LinkDB
All DBs
Position
287085..288296
Genome browser
AA seq
403 aa
AA seq
DB search
MSEISREILSVGDLNRAIAASLEERFDTVWVSGEISNFKAYDSGHWYFSLKDEEGQIRCV
MFRGRNGQVGFMPQSGDLVEVSANLGMYVPRGDIQLTIQTLRRAGMGGLYEAFLKLKAKL
AKEGLFDEERKRDIPAHPRSIGIITSPQAAALKDVLSTLARRAPHIPVVIYPTLVQGPDA
PAGMMNALKAAQKENAVDVILLVRGGGSIEDLWAFNDEQLAYAIAESAIPVVSGVGHETD
FTIADFVADVRAATPTGAAELAAPRRDQMLQELDAIMQALLQRIHQRVEREAQTLDQLAL
RLSHALPNPDRMREQIQGWQQRLNQAWSVRMENWNRNQTHYHSQLEMLNPQRTLERGYAV
ILSKEKDQLHAVRDPSELNIEHVFKIKLAEGQAEVQFSEVLRK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaatatcaagggaaattctgagtgttggcgatctcaaccgcgccattgcggcc
tctttggaggagcgctttgatacggtctgggtaagcggggagatttcgaacttcaaggct
tatgacagcggccattggtatttctccttaaaagacgaagaaggtcaaattcgctgtgtg
atgttccgaggccgtaatggccaggttgggtttatgccgcaatcaggagatttggttgag
gtcagcgctaatctcggcatgtatgtcccacgcggagatatacagttaaccattcaaacc
ctgcgtcgtgcaggtatgggtggtttatacgaagccttcttaaagctcaaagccaaactt
gccaaagagggcttatttgatgaagagcgtaaacgagatataccagcacaccctagatca
attggcatcatcacatctcctcaagctgcagcgctaaaagatgtcttgagtacattagca
agaagagcgccacatattccggttgtgatttatccaacgcttgtgcaaggaccagatgca
cccgctggaatgatgaatgcactaaaagccgcccaaaaagaaaatgcagtagatgtgatt
ttgctagtacgtggcggcggcagtattgaagatctatgggcatttaatgacgagcaactg
gcgtatgcaattgcagaatcagcgataccagtagtgagtggtgttggtcatgagactgat
ttcacgattgcagattttgttgctgatgtacgtgcagccactccaactggagcggcagag
ttggcggcaccaagaagagatcaaatgttgcaagagttagatgccatcatgcaagctttg
ttacagcgtattcatcaacgcgttgaacgtgaagcacaaaccttagatcaattagccctg
cgacttagtcatgccttgcctaatccggatcgcatgcgtgagcaaatacaaggttggcaa
caacgcctaaaccaagcctggtctgtgcgcatggaaaactggaatcgcaatcaaacgcat
taccactcacagttggagatgttaaatcctcagcgaactctggagcggggatatgcggtg
atattgagtaaagaaaaagaccaactgcatgcagtgcgtgatccaagtgagctcaatata
gagcacgtatttaagataaagctagctgagggccaagcagaggtccaattctcagaagtg
ctcagaaaatag
DBGET
integrated database retrieval system
