Polynucleobacter sp. KF022: PKF022_04400
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Entry
PKF022_04400 CDS
T10441
Name
(GenBank) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
polk Polynucleobacter sp. KF022
Pathway
polk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PKF022_04400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
polk03019
]
PKF022_04400
03009 Ribosome biogenesis [BR:
polk03009
]
PKF022_04400
03036 Chromosome and associated proteins [BR:
polk03036
]
PKF022_04400
Enzymes [BR:
polk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PKF022_04400
Messenger RNA biogenesis [BR:
polk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PKF022_04400
Ribosome biogenesis [BR:
polk03009
]
Eukaryotic type
90S particles
RNase
PKF022_04400
Prokaryotic type
rRNA processing factors
PKF022_04400
Chromosome and associated proteins [BR:
polk03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PKF022_04400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
BDT74775
LinkDB
All DBs
Position
421432..422223
Genome browser
AA seq
263 aa
AA seq
DB search
MNARAVIETGPLQERLGYTFKKPELLNQALTHRSHSKKNNERLEFLGDSILNCVVAEMLY
ERYSDLDEGDLSRVRANLVKQQALYEIAQTLSLSDYLRLGEGELKSGGFRRPSILADTLE
AVTGAIFMDGGFEAAKTSLRKLYSIILEHVDPKTLGKDDKTLLQECLQSYQLPLPAYNVT
GTTGAAHNQQFEVECLIPSHKVAVKGEGASRRAAEQAAAKLALIAMLKALPQESRKPKKT
RSAKKKAAKKEVTEEQFNLKLKG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgcgcgccgttatcgaaaccggaccactgcaagagcgcctcggctatacattt
aagaagcccgagttactaaatcaagctttaactcatcgcagtcatagtaaaaagaacaat
gagcgcctagagtttttgggcgactctattcttaattgcgttgtcgctgaaatgctctac
gagcgctactccgatttggatgaaggtgatttatctcgcgtgcgtgcgaatttagtaaag
cagcaagccttatatgaaattgctcaaaccctttctttgtcagattacttgcgcttaggc
gagggtgaattgaagagcggtggatttcgtcgcccttcaatcttggcagatactttagaa
gccgtcactggcgccatctttatggatggtggatttgaagcagctaagacaagcttacgt
aagctgtactccatcattttggagcatgttgatcccaaaaccttgggtaaagacgataaa
acgcttttgcaagaatgtttacaaagctatcaactgcctttgcctgcctataacgttact
ggcactactggcgcagcgcataaccaacaatttgaagtggagtgcttaatccctagccat
aaggtggcggtaaagggtgagggtgcttcacgccgtgctgctgagcaagcggctgcaaag
ttggccttgatagccatgctcaaagctttgccacaagaatctcgtaaacccaagaagact
cgatcggcgaaaaagaaagcggcaaaaaaagaagtaaccgaagagcagttcaatcttaag
ctgaaaggctaa
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