Polynucleobacter sp. KF022: PKF022_06980
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Entry
PKF022_06980 CDS
T10441
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
polk Polynucleobacter sp. KF022
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
polk03400
]
PKF022_06980
Enzymes [BR:
polk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PKF022_06980
DNA repair and recombination proteins [BR:
polk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PKF022_06980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_12
AAA_22
ResIII
DEAD
PRO8NT
Motif
Other DBs
NCBI-ProteinID:
BDT75033
LinkDB
All DBs
Position
670907..674422
Genome browser
AA seq
1171 aa
AA seq
DB search
MLPAKQTYSEKLACDPHRSVIVSACAGSGKTWLLVARMVRLLLDDVKPQEILALTFTRKA
AQEMRDRLYGLLEQFSKSDDASLMKELTARGMEEVQAEKYLPKARALYEQVLANPQPIVI
DTFHGWFGRLLGAAPVSLGIQPGFMLREDAKRLQEECLDDWWGDLTPELKAHYDVLLKYL
GSYETQKLLMGKSSLFKQRGAWTFFVKQCDQTGITPLEHLKQSLHKLNLPNPLLAQWSAP
NTLEDLQFLARCFQNSSVKDSDLLQYLLPAIACKERAGNVMEVASHFQTTFLTKEPKYRS
NNDKALGEAKKYLEKMGESHRIDEHIAIKQHWGHTFEEYLQWRAEQDVFAINEAWFALNQ
SMMAHANAQKENMRVRDFDDLEVGVSLLMGEPEHAAYLQSRLDAKYKQILVDEFQDTNPL
QWQILRAWLAGYSVGDEKPKVFIVGDPKQSIYRFRRADPRLFVSAAQFLHQHHGAAYIEQ
DKTRRNAHEINRVVNTIFQGEQVPPDYPYTEQQTLWTTPNEDRPTDAYAGRGEIYLLPLI
PYAEQTQEPREGSAFDGAIADSSETVGVIQRQREGELVARLIKEIIATRKVADKEGGREI
WREARASDFLLLVKRRKYLPQYERALRDVKLAYESPRLGGLLNTLEIDDLIALLTVLVTP
RHDLPLAQVLRSPIFGFAEKQMQQLAVAMTSGHYRSWWDALQDSKDAKLQGAARYLKHWH
LLGERLPVHDLLDRIYQEGDVRLKYAAVCQDLDRPQVLANLDAFLEVALNQDGGQYPSLS
RFIQEMNTKRRGDDDETPDEGDVDAASDDNLVEVDEESEMSEEDRHKRVRLMTIHGAKGL
ESPFVIILDANNTDTNVDYSGVLIDWAPQEESPSHLSLFTSKTLTSPRAEINEAEKLIGE
KENWNLLYVAMTRARQGLWISGDAQKPTTNNPSGLDKTSWYGKASKVELSVYQVGEQVVA
TDEFEVIKPAQENAVEDFVLDWDSAQESHTQMLSDIESGVTVEVFAGVDEQTGNPDPEIL
EEGTNFHKLLEFLTPDSSNETKPPMPSEQELMNWLSVDQDSAIKLITYVQKVLTTPELKH
YLTSGEWVQAWNELDITSKDGKSYRMDRLVEFDDHLAIIDYKLTIPEVGSDKYEKYRKQL
QGYQAELKRIRKDKSNKAYLISSKGEMVEVK
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgcttccagccaagcaaacctattcagaaaagctcgcttgcgatccccatcgctcggta
attgtttctgcttgcgcaggcagcggcaagacttggttattggtggcgcgcatggttcgc
ctattgctcgatgatgtgaagccgcaagaaattctcgcacttacatttacacgtaaggct
gcgcaagaaatgcgtgaccgcctatatgggttgctggagcaattttctaaaagtgatgat
gcctcattgatgaaagaacttaccgctagaggtatggaagaggtgcaagctgaaaaatac
cttcctaaagccagagcgctttatgagcaggtcctggcaaacccacagccgattgtgatc
gatacctttcatggctggtttggcaggttactaggagcagctccagtatcgcttggcatt
cagccggggttcatgttacgtgaggatgctaagcgactccaagaagagtgtcttgatgat
tggtggggcgatctcacgccagagctcaaagcgcattatgacgtcttgctcaaatattta
ggctcttatgagacgcaaaaactcttaatgggtaaaagcagcctctttaagcaaagaggt
gcatggaccttctttgtgaagcaatgtgatcaaaccggcatcacgcctttagagcaccta
aaacaatccctgcataagttgaatctacctaatccattgctggctcagtggagtgcacct
aatacgctagaggatctacagttcctagcgcgctgttttcaaaatagcagcgtaaaagat
agcgatcttttgcaatacttgttgccggccattgcctgcaaagagcgtgcaggcaatgtg
atggaagtcgcaagtcactttcaaactactttcttaaccaaagaaccaaaatatcgtagt
aataacgataaagctttgggtgaggcgaagaaatatctcgagaagatgggtgagtctcat
cgtatcgatgagcacatcgccattaagcaacattggggtcatacttttgaggagtacctc
caatggcgagccgagcaggatgtatttgctatcaatgaggcttggtttgccctaaatcaa
tccatgatggcgcacgcgaatgcccaaaaagaaaatatgcgcgtgcgtgattttgatgat
ttagaggttggcgttagtttattgatgggggagcctgagcatgcagcctatctgcaatcg
cgcctagatgcaaagtacaaacaaattttggtagatgagttccaagataccaacccattg
caatggcaaattctgcgagcctggttagcaggctatagcgtaggcgatgagaagccaaaa
gtatttattgtgggcgatcctaagcagtcgatttatcgctttcgtcgtgctgatcctagg
ctatttgtgagcgcagcgcagtttttacatcaacatcatggtgctgcttatattgagcag
gataaaacgcgtcgcaatgctcatgaaatcaatagggtcgtgaatactatctttcagggc
gagcaagtgccacccgattacccatatacagagcagcaaaccctatggactactccgaat
gaggataggcctaccgatgcttatgctgggcgaggtgagatttatttattacctttgatt
ccttatgcagagcagacgcaggaaccaagagagggtagtgcttttgatggtgctattgcc
gattcaagtgaaacggttggggtgattcagcgtcaacgtgagggtgaattggttgcgcgc
ctcattaaagaaattattgctacgcgtaaggtggcagataaagaaggtggcagggaaatt
tggcgcgaggccagggcgagtgattttctgttgctggtaaagcgtcgtaaatatttgcct
caatacgaaagagcgctgcgtgatgtaaagcttgcctatgaaagtccacgtttaggcgga
ttgcttaatactctagagattgatgacctcattgccttgctgactgttttggtaacacct
cgtcatgacttaccgctagcccaagttctgagaagtccgatttttggttttgctgaaaaa
caaatgcagcaattagcagtagcgatgacatctggtcattaccgctcctggtgggatgcg
ttgcaagatagtaaagatgcaaagcttcaaggtgcggcacgctatcttaagcattggcat
cttttgggtgagcgcttaccggttcatgacctgcttgaccgtatttatcaagagggtgat
gtgcgcctcaaatatgctgcagtctgtcaggatctcgatcgaccacaggtcttggcaaac
ttggatgccttcttagaagtggcgcttaatcaagatgggggtcaatacccaagcttgagt
cgttttattcaggagatgaataccaagcgccgtggcgatgatgatgaaacccctgacgag
ggggatgtcgatgcagcaagcgatgacaacctagtcgaagttgatgaagagagtgagatg
tcagaagaagatcgccataagcgtgtgcgactcatgacaattcacggtgctaaaggcttg
gagtcgccttttgtcatcatcctagacgcgaacaataccgataccaatgttgactacagt
ggcgtcttaattgattgggcgccacaagaagagagcccgtctcatttatctctgtttacc
tctaaaacattgactagccctcgcgctgagatcaatgaggctgagaagctaattggtgaa
aaagaaaattggaatcttttgtacgttgccatgactcgtgctcgccaaggcctatggatt
agtggtgatgcccaaaagcccactaccaataatcctagtggcttagataagacttcttgg
tatggcaaggcaagcaaggttgagttgtctgtgtatcaggtaggcgagcaagtggtagct
acggatgagtttgaggtcatcaaacctgcgcaagaaaacgcggttgaggattttgtcttg
gactgggactctgcgcaagaaagccatacgcaaatgctgtctgacatcgagagtggtgtg
acggttgaagtatttgcgggcgtggatgagcagacaggtaatcctgatccagaaatcttg
gaagagggtacaaacttccataagttgctagagttcctcactcccgattccagtaatgaa
acaaaaccacctatgccaagcgagcaggaactcatgaactggcttagtgttgatcaggac
agcgcaatcaaacttattacatacgtacaaaaagtgcttacaaccccagagttgaaacac
tatctgacatcaggcgagtgggtgcaggcttggaatgagctagatattactagtaaagat
ggcaagagctatcgcatggatcgcttggtggaatttgatgatcacttagccatcatcgat
tacaagctcaccattccagaagtgggtagtgataagtatgaaaagtaccgcaagcaattg
cagggctaccaggccgagctcaaacgcatcagaaaagacaagtcaaacaaggcttacttg
atttcatctaagggtgagatggttgaggtgaagtaa
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integrated database retrieval system
