Polynucleobacter sp. KF022: PKF022_07090
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Entry
PKF022_07090 CDS
T10441
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
polk Polynucleobacter sp. KF022
Pathway
polk03030
DNA replication
polk03430
Mismatch repair
polk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PKF022_07090
03430 Mismatch repair
PKF022_07090
03440 Homologous recombination
PKF022_07090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
polk03032
]
PKF022_07090
03400 DNA repair and recombination proteins [BR:
polk03400
]
PKF022_07090
Enzymes [BR:
polk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PKF022_07090
DNA replication proteins [BR:
polk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PKF022_07090
DNA repair and recombination proteins [BR:
polk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PKF022_07090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_16
RuvB_N
AAA_14
AAA_22
AAA_5
AAA_18
AAA_24
AAA_30
AAA_19
AAA_2
nSTAND3
TsaE
AAA_assoc_2
Mg_chelatase
Glyco_tranf_2_5
SKI
NTPase_1
APS_kinase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BDT75044
LinkDB
All DBs
Position
683631..685301
Genome browser
AA seq
556 aa
AA seq
DB search
MTALALARSWRPKTFSELVGQDHVVKALTHALDQGRLHHAWLFTGTRGVGKTTIARIMAK
ALNCTGSDGSGKMTSEPCGKCPACMEIDAGRFVDYIEMDAASNRGVDDIAALLEKAAYAP
SNGRYKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTILSRCLQFNL
KQMPVPLIVEHLEKVLASEKVEYEVNALRVLAKAAQGSMRDALSLTDQAIAYAAGKVTEE
SVRGMLGTLDDAYLIRILDCLIAKDGASLLSVANEMGERSMSFSLALQDLSSLLQKIAAA
QVVPESVLDDWPEAGEIRRLATQLTKEEAQLFYQITITSRPDLSLAPDEQTGFAMTLLRM
LAFRPGSGGGGSSSPAPSAPQVNTARPAPAAPASRTAAPAPTAKSASTAPAPASSAAASA
PVAAAGNSAERPDWHALMRQLPVKGLVQQLAFQTELQDWNDSAAGVRATIVTPMPQLASE
ASVGRLCDALTAHFGKPVKIVIEKGEVEGKTVAKVDAQIHQEKRMNAEQMIAADPFIQQL
EKEFGAKVVGGSVKPL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgacagcattggcattggcccgttcgtggcgccccaaaaccttctctgaattagtcggc
caagaccatgtggttaaggctttaactcatgctttggatcagggtcgcctgcaccatgca
tggctatttactggcacccgtggggtaggtaagaccaccattgcccgaattatggcaaaa
gccctcaattgcacaggatctgatggttccggcaagatgacttcagagccttgcggaaaa
tgcccagcttgcatggaaattgatgcaggtcgctttgttgactatatcgagatggatgcc
gcaagtaatcgtggtgttgacgatattgctgctctcctagaaaaagctgcttacgcacca
agtaatggtcgttataaggtttacatgattgacgaggtgcacatgctcaccaatcatgcc
tttaatgccatgctcaaaaccttggaagagcctccagagcacgtcaaatttattttggct
acaaccgatccgcaaaagatcccagttactattttgtctcgttgcttgcagttcaacctc
aagcaaatgccagtaccgctcatcgttgagcatttggagaaagtactcgcctccgaaaaa
gtggaatacgaagtcaatgccttgcgtgtcttagctaaagcagcccaaggctctatgcgt
gatgctctgtctctgaccgaccaagctattgcttatgccgccggcaaagtgactgaagag
tctgtccgcggcatgctcggcacattagatgatgcttatctcattcgcattctggattgt
ttgattgctaaagatggcgcaagccttctctctgttgcaaatgaaatgggcgaacgcagc
atgtccttctcattagcattgcaagatctctctagtttgttgcaaaagattgcagcagct
caagttgttcctgaatctgtattggatgattggccagaagcaggtgagattcgtcgtttg
gctactcaattaacaaaagaagaagcgcaactcttctatcaaattacaattactagtcgt
ccagatttatcacttgctccagatgagcaaaccggctttgctatgacgctcttgcgcatg
ttggcgtttcgtccgggcagtggtggaggcggtagttcatctccagcaccttcagctcca
caggtaaatacggctcgtccagcacccgctgcaccagcatccagaacagctgctcctgcg
cctacagcaaagtctgcctctaccgctccagctccagcatcttcggctgctgcttcagcc
ccggttgctgctgcaggtaactcagcagaacgtcccgattggcatgcattgatgcgtcag
ctgccagttaaaggcttggtgcagcagttggcgttccagacagagttgcaagattggaat
gactccgctgcaggtgtgcgtgcaacgattgtgacgccaatgccgcagctggcttccgaa
gcttctgttggtcgtttatgtgatgcgctgactgcgcactttggtaagccggtgaagatc
gtaattgaaaaaggtgaagtagagggcaagaccgttgctaaggttgatgcccagattcat
caagagaaaagaatgaacgctgagcaaatgattgcagctgatccattcattcagcaatta
gaaaaagagttcggcgccaaagtagttggtggctcagtaaagccactttaa
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