Polynucleobacter sp. KF022: PKF022_09130
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Entry
PKF022_09130 CDS
T10441
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
polk Polynucleobacter sp. KF022
Pathway
polk00730
Thiamine metabolism
polk01100
Metabolic pathways
polk01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PKF022_09130 (thiC)
Enzymes [BR:
polk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PKF022_09130 (thiC)
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BDT75248
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Position
complement(887542..889482)
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AA seq
646 aa
AA seq
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MSTGKTSTKNAKHEIPSLKSLERDFGQKFAYPASTKTYLQGSRADIKAPIRMIEQLPTRV
GEELLANPPVPVYDTSGPYSDPDVVINLEKGLPRLRDTWIAERNDTIQLAGPSSEYGVAR
SQDEATQNLRFSHISAPRVAKPGHNVSQMHYARQGIITPEMEYVALRESMGLEQLRKDPA
YKQLLKQHPGKGYGANLPEIITGEFVRSEIAAGRAIIPANINHPELEPMIIGRNFRVKIN
GNLGNSAVTSSINEEVEKMVWSIRWGADTIMDLSTGKHIHETREWIIRNSPVPIGTVPIY
QALDKTGGIAEDLTWEMFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTADRITGIVSRGGS
IMAKWCLAHHKENFLYTKFDEICEIMKAYDVSFSLGDGLRPGCIADSNDAAQFGELHTLG
ELTAKAWKHDVQVMIEGPGHVPMQRIEENMTEELKHCLEAPFYTLGPLITDIAPGYDHIT
SGIGAAQIGWYGTAMLCYVTPKEHLGLPDKEDVREGIITYKIAAHGADLAKGLPGAQVRD
NALSKARFEFRWEDQFNLGLDPERAREYHDATLPAEGAKIAHFCSMCGPKFCSMKITQEV
RDYAATLDADGNPKAKVIPITEVSDASKGMEEMSAEFRKRGSEIYQ
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaggtaagacttcaactaaaaacgctaaacacgagattccgagcttaaaaagc
ttggagcgcgactttgggcaaaagtttgcctatcccgcctcaacaaaaacttatctacaa
ggctcaagagcagatatcaaagcgccaatccgcatgattgagcaactccctactcgtgta
ggcgaagaattattagcaaatccccctgttcctgtttatgacacctctggaccatacagt
gatccggatgttgtgatcaatcttgaaaaaggtttgccaagactgcgtgatacatggatt
gcggagcgtaatgacaccattcaattggctggccctagttctgaatacggtgtagcgcgc
tctcaggatgaagctacacaaaatttacgcttctctcatatcagcgctccacgtgtcgcc
aaacctggtcataacgtaagtcaaatgcactacgcacgccaaggcatcatcactcctgaa
atggaatacgttgctctgcgtgaatccatgggccttgagcaactccgcaaggaccctgct
tacaagcagctccttaagcaacatcctggcaaaggttatggtgccaacctacctgaaatc
attaccggtgaatttgtgcgttctgagattgctgctggtcgcgcgattattccggctaac
attaatcaccctgaattagagccaatgattattggtcgcaacttccgcgtaaagattaac
ggcaacttgggtaactctgctgttacctcatctatcaatgaagaagtggaaaagatggtc
tggtccattcgctggggtgcagacaccatcatggatctttctactggtaaacatattcat
gaaacccgcgaatggatcattcgcaactctccagttccaattggtaccgttcctatctac
caagcattagacaaaactggtggcattgcagaagatctcacttgggaaatgttccgtgat
accttaattgagcaggctgaacaaggcgtggattacttcactattcatgcgggtgtattg
cttcgctatgttccactaacggctgatcgtattaccggtattgtttctcgtggcggttcg
atcatggctaaatggtgcttggctcaccacaaagaaaacttcctttatacgaagtttgat
gagatttgcgaaatcatgaaagcctatgacgtctcatttagcttgggcgatggcttacgt
cccggctgtattgctgactccaatgatgccgcacagtttggtgaacttcataccttaggt
gagttaactgccaaagcatggaagcatgatgtgcaagtcatgattgaaggtcctggccac
gtaccaatgcagcgcattgaagaaaacatgacagaagagctcaaacattgcttagaagcg
cctttctacacgcttggaccattgattacagatattgccccaggttacgaccacatcact
agtggtattggtgcagcgcaaattggttggtacggtactgccatgctttgctatgtcaca
ccaaaagagcacttaggcttgccagacaaagaagacgtccgcgaaggcatcatcacttac
aagattgcagctcatggtgctgacttggctaaaggcttgccgggcgctcaagtgcgcgat
aacgctttatctaaagcccgctttgaattccgctgggaagatcagttcaatctcggttta
gatcctgagcgtgcgcgtgaatatcacgatgctactttgccggctgaaggcgcaaagatt
gctcacttctgctcgatgtgcggtccgaagttctgctccatgaagatcacacaagaagta
cgtgactatgcagcgactttagatgctgatggcaatccaaaagccaaagtcattccgatt
actgaggtttctgatgcatccaaaggcatggaagagatgtctgcggagttccgcaaacgc
ggtagtgagatttatcagtaa
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