Polynucleobacter sp. KF022: PKF022_11300
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Entry
PKF022_11300 CDS
T10441
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
polk Polynucleobacter sp. KF022
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
polk03016
]
PKF022_11300 (truB)
Enzymes [BR:
polk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PKF022_11300 (truB)
Transfer RNA biogenesis [BR:
polk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PKF022_11300 (truB)
Prokaryotic type
PKF022_11300 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BDT75465
LinkDB
All DBs
Position
complement(1118232..1119143)
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AA seq
303 aa
AA seq
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MAIRIDGVVLLDKPAGMSSQGAVTAVKRAFNADKAGHTGTLDPMATGLLPICLGEATKYS
QDLLEADKTYIAQVKFGSRTDTGDAEGQIIEELPLPAFASDAEMKAALDALLPKFTGAIS
QVPPMYSALKRDGKPLYEYARAGVELERAPRDIIIHSIRWTNINWPEATLEVSCSKGTYI
RVLAEDIGNALGCGAHLVGLRRTEVGHLTLEQSFTIESIQSGLQNTADYILPVDALLQTL
PHLTVDEQQAKRLEMGQRVPLNLPSIEALVRIYRATAAPHNFIGTADWRSGVLHPKRLIS
QAH
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggctatcagaatcgacggcgtagtgctgctagataaacccgctggaatgagttcacag
ggtgcagtgactgcggtcaagcgtgctttcaacgcggataaagcaggtcatactggtact
ttagatccaatggctaccggcctattaccgatctgcttgggtgaggctactaagtattcg
caagatttgctcgaagcagataaaacttatatcgctcaggtgaaatttggttcacgcact
gatactggtgatgcagaaggccaaattattgaagaattgccgttaccagcattcgcaagt
gatgcggaaatgaaggcagccttagatgcgctgctacctaaatttactggcgccatttct
caagtgccgccaatgtattcggctttgaagcgtgatggcaaacctctttacgaatatgct
cgtgctggtgttgagttagaacgtgcaccacgtgacatcattattcattccattcgttgg
actaatatcaactggccagaagctactctagaagtgagttgcagcaagggcacctatatt
cgtgtgctggctgaagatattggtaacgccctgggttgtggcgctcatttagttggcttg
cgccgtactgaagtaggacacctaactctcgaacagtcttttacgatcgaatcaattcaa
agcggcctacaaaatactgctgactatatattgccagtagacgcgctcttgcaaacattg
ccacacctcacggtagatgagcaacaagccaagcgtctggagatggggcaacgtgttcca
ctcaatttaccttcaatcgaggcattagttcgcatctatcgcgcaactgctgctccccat
aactttattggtactgctgattggcgctctggagttttacatccgaaacgcttaatttcc
caggcacattaa
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