Polynucleobacter sp. KF022: PKF022_14550
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Entry
PKF022_14550 CDS
T10441
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
polk Polynucleobacter sp. KF022
Pathway
polk03030
DNA replication
polk03430
Mismatch repair
polk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PKF022_14550
03430 Mismatch repair
PKF022_14550
03440 Homologous recombination
PKF022_14550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
polk03032
]
PKF022_14550
03400 DNA repair and recombination proteins [BR:
polk03400
]
PKF022_14550
Enzymes [BR:
polk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PKF022_14550
DNA replication proteins [BR:
polk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PKF022_14550
DNA repair and recombination proteins [BR:
polk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PKF022_14550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
GIY-YIG_UvrC
UvrC_M
Cho_C
GIY-YIG
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BDT75790
LinkDB
All DBs
Position
complement(1444861..1446255)
Genome browser
AA seq
464 aa
AA seq
DB search
MNKQSFDYPALAFVDIETTGSNFDRDRITEIGIKTLSNNGVAIWESLINPHVYIPQNIQR
LTGISPQMVSDKPGFEEIAGDLKAELEGKIFVAHNARFDYGFIKASFKRIGLDFKPKVLC
TVKLSRLLFPNQARHNLDTIIREHSLTVSARHRALGDADLLFQFWQICERAVGKERLLEA
LNQLIGNASLPPNIDQELIDSIPDAPGCYIFYGENRTPLYIGKSISLRSRVMGHFQGSLT
QRKEMKLSLQVRDIDWIETSGELGALILESRLIKERMPSMNIKLRRSRDLCAWSLDKDTS
GVLKPTLVNHADLMPGLQDNLFGLFYNKREANSYLKAVAKKYRLCEVLLGLEKAVDGKAC
FGYQVKQCGGACIGIMPTEMHNLQLRTAMELYRVQVWPYKGPIAIKENGEMIVLDKWCYL
GTAINEDELIELKSTGDAEFDLDIYKIVKKALAGQYKNQVIHLS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcaatcgttcgactatccagcacttgcttttgttgatatcgagacaactggt
tcgaattttgacagagatcgcattacagaaataggcattaaaacgctttctaataacgga
gttgctatctgggagagcttaatcaacccccatgtctatattccacaaaatattcaaaga
ctcactgggatctccccgcaaatggtgtctgataaacctggctttgaagaaattgccgga
gacctaaaggcagagctcgaaggtaagatatttgtagcccacaacgcgcgatttgattat
ggatttattaaggcctcttttaaaagaataggcttggatttcaagcccaaggtcttgtgt
accgtcaaactctcaagacttctatttcctaaccaagctcgtcacaatctagacactatc
attcgtgagcatagtttgactgtcagcgctagacatagggcgcttggcgatgcagacttg
ctttttcagttttggcaaatctgcgaaagggcggttggtaaggagcgcttgttggaagct
cttaatcagttaattggaaatgcaagtctgccaccgaacatcgatcaggaattgattgat
tcgatacctgatgcgcctgggtgctatatcttttacggagaaaatagaacccccttatat
attgggaagagtatttccctgcgcagtagggtgatggggcactttcaaggctcgttaacc
cagcgcaaggaaatgaaattatctttacaggtgagagatattgactggattgaaactagt
ggagaactaggagctttgatattggagtctaggctgattaaagagcgtatgcctagtatg
aatatcaagcttcgtcgctcaagggatctttgtgcttggagtcttgataaagataccagt
ggtgtactaaagccaacgcttgtgaatcacgcagatctcatgccaggccttcaagataat
ctttttggtttgttttataacaaacgagaggcaaattcatatctcaaggcagttgccaaa
aaatatcgcttatgcgaagtattgcttggacttgagaaagcggttgatggaaaagcctgc
tttggatatcaagtgaagcaatgtggtggtgcgtgcattggcatcatgccaactgaaatg
cataatctgcagttaagaacggcaatggagttatatagagtgcaggtttggccttataag
ggcccaatagccatcaaagaaaatggagaaatgattgttttggataaatggtgctatttg
ggtaccgccataaatgaggatgagttgattgagctcaaaagtactggcgatgctgaattc
gatcttgatatttataagatcgttaaaaaagcactagccggacagtataaaaaccaagtg
attcatcttagttaa
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