Polynucleobacter sp. KF022: PKF022_15110
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Entry
PKF022_15110 CDS
T10441
Name
(GenBank) hypothetical protein
KO
K03086
RNA polymerase primary sigma factor
Organism
polk Polynucleobacter sp. KF022
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PKF022_15110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
polk03021
]
PKF022_15110
Transcription machinery [BR:
polk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PKF022_15110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BDT75846
LinkDB
All DBs
Position
complement(1500317..1502914)
Genome browser
AA seq
865 aa
AA seq
DB search
MPNTKTKKPAPKAKTPAKPVKVVAKPAAKAKAPAKPVKAAPKPAAKAKAPAKPVKAAAKP
VAKTKTPAKPVAKVKAPAKPVKAAAKPVAKTKTPAKPVAKVKAPTKPVKAAAKPAAKPAK
AAAKPAPAKPAVKAPAKSAKAEIKVELAKKGKAVAAPKAEPFKETKAAKETKGAKEVKGK
KAKTAELEAPVVVEEEKKRGRKAKAEAPADNAEPVLTDRQKARERKAKEKALLKEFAAQQ
LGTEEQQELRRARLKTLIKMGMSKGYLTHGEMNDVMSDELSDADALETLISLLNDIGITV
YEQAPDAETLILSDNTAAAASEEEAEEEAEAALSTVDSEFGRTTDPVRMYMREMGTVDLL
TREGEIVIAKKIEAGLKDMVMALAACPVTIAEILTNVDKIASGEMEIDQFVDGLVDPNAE
DIKLGPEEPEVDPDAEEGEEGEEDDAGGGGGGAATANAKQLEELKQISLEKFAIVRTQAD
KMRRAFDKDGYNCPAYVKAQDAIRAELLGFRLTAKSVEKLCDTMRSQVDQVWKLERGIVS
LLVDKVGVNRGEVLKDFPKMSMNLTWTDKLLKENKPYSALLQRNVPAIQELQQKLIDIQK
NVVIPLPELKEVNKQMIAGEKRAREAKREMTVANLRLVISIAKKYTNRGLQFLDLIQEGN
IGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQ
ILQETGHEPDAATLALKMEIPEDKIRKIMKIAKEPISMETPIGDDEDSHLGDFIEDGNTL
APAEAALHDSMRDVVKDVLDSLTPREAKVLRMRFGVEMSTDHTLEEVGKQFDVTRERIRQ
IEAKALRKMRHPSRSDKLKTFLEED
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgccgaataccaagaccaaaaaaccagctccaaaagcgaaaacacctgctaagccagta
aaggtagttgcaaaacctgcagctaaagcaaaagctcctgctaagccagtaaaggctgct
cctaaacctgcagctaaagcaaaagctccagctaagccagtaaaggcagctgcaaagcca
gttgccaaaacaaagactccagctaagccagttgctaaagtaaaagctccagctaagcca
gtaaaggcagctgcaaagccagttgccaaaacaaagactccagctaagccagttgctaaa
gtaaaagctccgactaagccagtaaaggcagctgcaaagccagccgctaaaccagcaaag
gccgcagcaaaaccagctccggctaaaccggctgttaaagctcctgcgaaatccgctaaa
gcagaaatcaaagttgagctggccaaaaaaggtaaagcagtagcagcacctaaggctgag
ccatttaaagaaacaaaagcagcaaaagaaactaaaggcgcaaaagaagtcaaaggcaaa
aaagctaagactgcagaactagaagcacctgtagttgttgaagaagaaaagaagcgtggc
cgcaaagcgaaagcagaagcacctgcggataatgctgagccggtattaacggatcgtcaa
aaagcgcgcgagcgtaaggcgaaagaaaaggcgctcttaaaagagtttgctgctcaacag
ttaggaactgaagagcaacaagagttacgtcgtgctcgcttgaagactttgatcaagatg
ggtatgtccaagggttacttaacccatggcgagatgaatgacgtgatgtctgatgagtta
tctgatgcggacgcattggaaactttgattagcttgcttaatgacatcggtattactgtt
tacgaacaagcaccagacgcagaaacattaattctttctgacaatacagctgctgcagct
tctgaagaagaggctgaagaagaggctgaagccgctttatctactgttgattccgagttc
ggacgtaccactgacccagtacgtatgtatatgcgtgagatgggtacggttgatttgctg
actcgcgagggcgagatcgtcattgcgaagaagattgaagctggtctcaaagacatggtg
atggctttggctgcttgtcctgtaaccattgctgagattttgactaacgttgacaagatc
gctagcggtgagatggagattgaccagtttgtggatggtttggtcgatccaaatgcggaa
gatattaagctcggacctgaagagccagaggtagacccagatgctgaagaaggcgaagag
ggtgaagaggatgatgctggcggcggtggcggcggtgctgcaacggcaaatgctaagcaa
ttagaggagttaaagcagatttctttagagaagtttgcaatcgttcgtacacaagctgac
aagatgcgtcgcgcgtttgataaagacggttacaactgtcctgcatacgtgaaggcgcaa
gatgccattcgtgctgaattactgggtttccgtttaacagcgaaaagtgtagagaagtta
tgcgacaccatgcgctcacaagtagaccaagtatggaagcttgagcgtggcatcgtgagc
ttgttggtagacaaagttggcgttaatcgtggtgaagtactaaaagattttcctaagatg
tctatgaacttgacctggactgacaagttgctcaaagagaacaagccatacagcgcactc
ttgcagcgtaacgttccagcaattcaagaattgcaacagaagttgattgacattcagaag
aatgttgttattccacttccagaattaaaagaagtgaataagcaaatgatcgccggcgag
aagcgtgcccgcgaagcgaagcgtgagatgactgtagccaacttacgtttggtaatctcg
attgctaagaaatacaccaaccgtggcttgcagttcttggatctgattcaagaaggcaac
atcggtttgatgaaggcggtggataagtttgaataccgtcgtggttataagttctctact
tatgcaacatggtggattcgtcaggcgattactcgttcgattgctgaccaagcacgtacg
atccgtatcccagttcacatgattgagacgatcaacaagatgaaccgtatcagccgtcaa
attttgcaagagactggtcacgagccagatgctgcaacattggcactgaagatggagatt
ccagaagacaagatccgtaagatcatgaagattgctaaagagcctatctccatggagaca
ccaattggtgacgatgaagattctcatttaggcgacttcattgaagacggcaataccttg
gctccagcagaagcagcattgcatgactctatgcgcgatgttgtgaaagacgttctcgat
tcattgacgccacgcgaagcaaaagtattgcgcatgcgctttggtgttgagatgagcact
gatcacactcttgaagaggttggcaaacagtttgacgttactcgtgagcgtattcgtcag
attgaagctaaggctctccgcaaaatgcgtcatccaagccgtagcgacaaactcaagacc
ttcctcgaagaagattga
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