KEGG   Polynucleobacter sp. KF022: PKF022_15110
Entry
PKF022_15110      CDS       T10441                                 
Name
(GenBank) hypothetical protein
  KO
K03086  RNA polymerase primary sigma factor
Organism
polk  Polynucleobacter sp. KF022
Brite
KEGG Orthology (KO) [BR:polk00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    PKF022_15110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:polk03021]
    PKF022_15110
Transcription machinery [BR:polk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PKF022_15110
SSDB
Motif
Pfam: Sigma70_ner Sigma70_r3 Sigma70_r2 Sigma70_r1_1 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: BDT75846
LinkDB
Position
complement(1500317..1502914)
AA seq 865 aa
MPNTKTKKPAPKAKTPAKPVKVVAKPAAKAKAPAKPVKAAPKPAAKAKAPAKPVKAAAKP
VAKTKTPAKPVAKVKAPAKPVKAAAKPVAKTKTPAKPVAKVKAPTKPVKAAAKPAAKPAK
AAAKPAPAKPAVKAPAKSAKAEIKVELAKKGKAVAAPKAEPFKETKAAKETKGAKEVKGK
KAKTAELEAPVVVEEEKKRGRKAKAEAPADNAEPVLTDRQKARERKAKEKALLKEFAAQQ
LGTEEQQELRRARLKTLIKMGMSKGYLTHGEMNDVMSDELSDADALETLISLLNDIGITV
YEQAPDAETLILSDNTAAAASEEEAEEEAEAALSTVDSEFGRTTDPVRMYMREMGTVDLL
TREGEIVIAKKIEAGLKDMVMALAACPVTIAEILTNVDKIASGEMEIDQFVDGLVDPNAE
DIKLGPEEPEVDPDAEEGEEGEEDDAGGGGGGAATANAKQLEELKQISLEKFAIVRTQAD
KMRRAFDKDGYNCPAYVKAQDAIRAELLGFRLTAKSVEKLCDTMRSQVDQVWKLERGIVS
LLVDKVGVNRGEVLKDFPKMSMNLTWTDKLLKENKPYSALLQRNVPAIQELQQKLIDIQK
NVVIPLPELKEVNKQMIAGEKRAREAKREMTVANLRLVISIAKKYTNRGLQFLDLIQEGN
IGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQ
ILQETGHEPDAATLALKMEIPEDKIRKIMKIAKEPISMETPIGDDEDSHLGDFIEDGNTL
APAEAALHDSMRDVVKDVLDSLTPREAKVLRMRFGVEMSTDHTLEEVGKQFDVTRERIRQ
IEAKALRKMRHPSRSDKLKTFLEED
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgccgaataccaagaccaaaaaaccagctccaaaagcgaaaacacctgctaagccagta
aaggtagttgcaaaacctgcagctaaagcaaaagctcctgctaagccagtaaaggctgct
cctaaacctgcagctaaagcaaaagctccagctaagccagtaaaggcagctgcaaagcca
gttgccaaaacaaagactccagctaagccagttgctaaagtaaaagctccagctaagcca
gtaaaggcagctgcaaagccagttgccaaaacaaagactccagctaagccagttgctaaa
gtaaaagctccgactaagccagtaaaggcagctgcaaagccagccgctaaaccagcaaag
gccgcagcaaaaccagctccggctaaaccggctgttaaagctcctgcgaaatccgctaaa
gcagaaatcaaagttgagctggccaaaaaaggtaaagcagtagcagcacctaaggctgag
ccatttaaagaaacaaaagcagcaaaagaaactaaaggcgcaaaagaagtcaaaggcaaa
aaagctaagactgcagaactagaagcacctgtagttgttgaagaagaaaagaagcgtggc
cgcaaagcgaaagcagaagcacctgcggataatgctgagccggtattaacggatcgtcaa
aaagcgcgcgagcgtaaggcgaaagaaaaggcgctcttaaaagagtttgctgctcaacag
ttaggaactgaagagcaacaagagttacgtcgtgctcgcttgaagactttgatcaagatg
ggtatgtccaagggttacttaacccatggcgagatgaatgacgtgatgtctgatgagtta
tctgatgcggacgcattggaaactttgattagcttgcttaatgacatcggtattactgtt
tacgaacaagcaccagacgcagaaacattaattctttctgacaatacagctgctgcagct
tctgaagaagaggctgaagaagaggctgaagccgctttatctactgttgattccgagttc
ggacgtaccactgacccagtacgtatgtatatgcgtgagatgggtacggttgatttgctg
actcgcgagggcgagatcgtcattgcgaagaagattgaagctggtctcaaagacatggtg
atggctttggctgcttgtcctgtaaccattgctgagattttgactaacgttgacaagatc
gctagcggtgagatggagattgaccagtttgtggatggtttggtcgatccaaatgcggaa
gatattaagctcggacctgaagagccagaggtagacccagatgctgaagaaggcgaagag
ggtgaagaggatgatgctggcggcggtggcggcggtgctgcaacggcaaatgctaagcaa
ttagaggagttaaagcagatttctttagagaagtttgcaatcgttcgtacacaagctgac
aagatgcgtcgcgcgtttgataaagacggttacaactgtcctgcatacgtgaaggcgcaa
gatgccattcgtgctgaattactgggtttccgtttaacagcgaaaagtgtagagaagtta
tgcgacaccatgcgctcacaagtagaccaagtatggaagcttgagcgtggcatcgtgagc
ttgttggtagacaaagttggcgttaatcgtggtgaagtactaaaagattttcctaagatg
tctatgaacttgacctggactgacaagttgctcaaagagaacaagccatacagcgcactc
ttgcagcgtaacgttccagcaattcaagaattgcaacagaagttgattgacattcagaag
aatgttgttattccacttccagaattaaaagaagtgaataagcaaatgatcgccggcgag
aagcgtgcccgcgaagcgaagcgtgagatgactgtagccaacttacgtttggtaatctcg
attgctaagaaatacaccaaccgtggcttgcagttcttggatctgattcaagaaggcaac
atcggtttgatgaaggcggtggataagtttgaataccgtcgtggttataagttctctact
tatgcaacatggtggattcgtcaggcgattactcgttcgattgctgaccaagcacgtacg
atccgtatcccagttcacatgattgagacgatcaacaagatgaaccgtatcagccgtcaa
attttgcaagagactggtcacgagccagatgctgcaacattggcactgaagatggagatt
ccagaagacaagatccgtaagatcatgaagattgctaaagagcctatctccatggagaca
ccaattggtgacgatgaagattctcatttaggcgacttcattgaagacggcaataccttg
gctccagcagaagcagcattgcatgactctatgcgcgatgttgtgaaagacgttctcgat
tcattgacgccacgcgaagcaaaagtattgcgcatgcgctttggtgttgagatgagcact
gatcacactcttgaagaggttggcaaacagtttgacgttactcgtgagcgtattcgtcag
attgaagctaaggctctccgcaaaatgcgtcatccaagccgtagcgacaaactcaagacc
ttcctcgaagaagattga

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