Polynucleobacter sp. KF022: PKF022_15240
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Entry
PKF022_15240 CDS
T10441
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
polk Polynucleobacter sp. KF022
Pathway
polk03030
DNA replication
polk03410
Base excision repair
polk03420
Nucleotide excision repair
polk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PKF022_15240 (polA)
03410 Base excision repair
PKF022_15240 (polA)
03420 Nucleotide excision repair
PKF022_15240 (polA)
03440 Homologous recombination
PKF022_15240 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
polk03032
]
PKF022_15240 (polA)
03400 DNA repair and recombination proteins [BR:
polk03400
]
PKF022_15240 (polA)
Enzymes [BR:
polk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PKF022_15240 (polA)
DNA replication proteins [BR:
polk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PKF022_15240 (polA)
DNA repair and recombination proteins [BR:
polk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PKF022_15240 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PKF022_15240 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
ImpE
Motif
Other DBs
NCBI-ProteinID:
BDT75859
LinkDB
All DBs
Position
complement(1514919..1517744)
Genome browser
AA seq
941 aa
AA seq
DB search
MTKHRLLLVDGSSYLYRAFHAMPDLRNGAGEPTGAIYGMVNMMRRARSELKADHIACVFD
AKGKTFRDEMYSEYKAHRSPMPEDLVKQIEPIHAMVKALGWPVLMVSGVEADDVIGTLAC
QATQAGWETIISTGDKDLAQLVNPSVTLINTMTNEKLDIDGVKEKFGVPPELIVDYLSII
GDTVDNVPGVPKAGPKTANKWLSEFGNLDNLMANADQVKGVVGENLRASLDWLPQARQLI
TVKTDCDLSPHLPGLDDLHAKSEDAPLLRELFERYAFKTWLRDVEKQLTSPENKGDTVTF
DLAGSPISALENGAEQEKKTRVIASAPTKDLSQETRDSQDAIERHYECIVDEAGLEKWLK
KIESSALTAVDTETTSLDALAAELVGISLSVKPGEACYIPVAHRNGEVQLDRDLVLARMK
SWLESETHLKVGQNLKYDAHIFANYGITLKGVAFDTLLESYVLESHLPHNMDSLAERHLG
MKTIRYEEVCGKGVHQIGFDQVDLKIATDYAAEDADITLRLHLELWPQIQESQGLLYIYE
KVEMPAMRVLGIMERNGIRIDSELLAKQGQQVGIRLLELEGEIHKLAGQPFNIQSPKQIA
EILFGQLELPVIKKTPSGAPSTDEEVLQKLAEDYPLPARILDYRSLAKLMSTYIEKLPRM
ADPKTGRVHTNFSQATAVTGRLASSDPNLQNIPVRTEEGRRIREAFIPAEGCKLLSADYS
QIELRIMAHIAEDENLLAAFRDGKDVHQATAAEIFGVALGDVNSEQRRYAKVINFGLIYG
MSAFGLAGNLGIERSAAQNYIAKYFDRYPGVAQYMERTRLEARENGYVETVFGRRLWLPE
IKGSNGPRRQGAERAAINAPMQGTAADLIKLAMIAVEDWLEKEQLKTKMLLQVHDELVFD
VPLDEIDLLQAKLPDLMCHVAQLKVPLVVSIGIGDNWEEAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacatagactcttgttggtagacggttctagctacctctatcgcgccttccat
gctatgccagaccttagaaatggggctggagagcctactggggctatatatggcatggtc
aatatgatgcgccgagcccgttctgagctcaaggctgaccatatagcctgtgtttttgat
gccaagggcaaaacttttcgcgatgaaatgtactccgagtacaaggcccatcgctcacct
atgccggaagacttggtcaagcagatagagcctattcatgccatggtcaaagcattaggt
tggcccgtcctcatggtaagcggagtcgaggcggatgacgtaattggtacgttagcttgt
caagcgacgcaagccggctgggaaactattatttccactggagataaagatttagcgcaa
ttggtaaatccttctgtcactctgatcaatacgatgacgaatgaaaagttggatattgat
ggcgttaaagaaaagtttggcgttcctcctgaattgatcgttgattatttatctatcatt
ggcgataccgttgataacgtaccaggtgtgcccaaagctggtcctaaaacagcaaacaaa
tggttgtcagaatttggtaatctcgataacttgatggccaacgctgatcaggtgaaaggc
gttgttggcgaaaatcttcgcgcttcactcgattggttgccgcaagctcgtcaacttatt
accgtaaaaacagattgtgatttatcccctcacttgcctggtctagatgatttgcatgcg
aagtctgaagatgcgcctttgctgcgggagttatttgagcgctatgcatttaagacttgg
ttgcgtgatgtagaaaagcaacttacaagcccggaaaataagggcgatacagtgactttt
gatttggcaggcagccctatttctgccctagaaaacggagcagagcaagaaaaaaagaca
cgcgtgattgcgagcgcaccaaccaaagatttgtcacaagaaactcgtgactcgcaagat
gcaatcgagcgccattatgaatgtattgtcgatgaggcgggtttagagaagtggttaaaa
aagattgagtcttctgcattgactgcggtggacacagaaactactagtcttgatgcgctt
gcagcagagcttgtgggcatttctttgtcagtgaagccgggggaggcttgctacattccg
gttgcacatcgcaatggtgaggtgcaactcgatcgtgatttggtgttagcgcgcatgaaa
tcttggctagaaagtgagactcatttaaaggttgggcaaaacctcaagtacgacgctcat
atcttcgctaattacggcatcacattaaaaggtgttgcattcgatactttgctcgaatca
tatgtactcgagtcccatctgccacacaatatggacagcttggctgaacgccatctgggt
atgaagactattcgctatgaagaggtttgtggcaaaggcgttcatcagattggctttgat
caggtagatctgaagattgcaaccgactatgcggctgaagatgcggacattacattgcgt
cttcacctggagctctggcctcaaattcaggagagccaaggcctgctctacatttatgag
aaggtagagatgcctgccatgcgagtgctgggcatcatggagcgcaatggcattcggatt
gactctgagctgcttgctaagcagggccagcaggtgggtatacgtcttttggagcttgag
ggagaaatccacaagttggcaggccaacctttcaatattcagtcaccaaaacaaattgca
gaaattttgtttggacagcttgagctgccggtgattaaaaagactccatcgggcgcgcca
tcaaccgacgaagaagttctgcagaagctcgcagaggattaccctctacctgcacgcatc
ttggactatcgtagtttggcgaagttgatgtcgacctatattgagaagttgcctcgtatg
gcagatcctaagacggggcgcgtgcatacgaatttttctcaagctacggccgttactggc
cgcttggcctcaagcgatccaaacctgcaaaacattcctgttcgcactgaagagggtagg
cgtattcgggaagcatttattcctgcggaaggctgcaaattattgtcagctgactattct
cagattgagttacgcatcatggcgcacattgctgaagatgaaaatcttttagccgctttt
agagatggtaaggatgtgcaccaagctactgcagcagaaatctttggcgttgctttgggt
gatgtgaattctgagcaacgtcgctatgccaaggtgattaactttggtctgatttatggc
atgagtgcttttggtttggcgggtaatttaggtattgaacgttctgctgcgcaaaactat
attgccaaatactttgatcgctatcctggagttgctcaatacatggaacgtactcgtctc
gaggctagagagaatggatacgttgaaactgtctttgggcgccgtctttggctgcctgag
attaagggctccaatggcccccgtcgccagggtgccgaacgcgcagctattaatgcccca
atgcaaggtactgctgcagacctcatcaagttagccatgattgctgtagaagattggctt
gaaaaagagcagttaaaaacaaaaatgctgcttcaggtacatgatgaattggtatttgac
gtacctttagatgagattgacctgctgcaggccaagttacccgatttaatgtgtcatgtg
gctcaattgaaggtacctttggtggttagtatcgggattggcgataattgggaagaagcg
cattaa
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