Polynucleobacter sp. KF022: PKF022_15280
Help
Entry
PKF022_15280 CDS
T10441
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
polk Polynucleobacter sp. KF022
Pathway
polk03420
Nucleotide excision repair
polk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PKF022_15280
03430 Mismatch repair
PKF022_15280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
polk03400
]
PKF022_15280
Enzymes [BR:
polk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PKF022_15280
DNA repair and recombination proteins [BR:
polk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PKF022_15280
MMR (mismatch excision repair)
Other MMR factors
PKF022_15280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BDT75863
LinkDB
All DBs
Position
complement(1520027..1522393)
Genome browser
AA seq
788 aa
AA seq
DB search
MYSDLLANLNPEQREAVTLPPVNENGQAQSALILAGAGSGKTRVLTTRIAWLIQTGQVSP
IGVLAVTFTNKAAKEMMLRLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPSTFQIL
DTQDQLSAIKRLLKGLKVDDEKYPAKQLQYFIAHAKERGQRAKDLSVGDDFQAKMAQLYA
AYDEQCQREGVVDFAELLLRSYELLKHSEAIRTHYQERFRHILIDEFQDTNALQYAWLKL
LSGHDTSRINVSGMGSSSVFAVGDDDQSIYAFRGADVENMRLYEKQYHPLMVKLEQNYRS
HGHILDTANHLIANNSERLGKNLRTDAGHGEPVRIYEAPSDHAEAAWLVDEIKALVNSGI
KRTEVALLYRSNAQSRIIEHALFSAGIPYRVYGGLRFFERAEIKHALAYLRLLENPNDDT
SFSRVVNFPTRGIGARSIEALQDAARAQQCSLYLAASSLEGKAGAALGGFVRLVDHMREA
TRHNTLPETVEFVIQHSGLIQHYLSEREGQDRVENLQELINAATAFIAEEGYGQDAAAAM
LPGENAPGVVEVSPLAAFLSHASLEAGDNQAQAGQDAVQLMTVHSAKGLEFTSVFITGLE
EGLFPHENSVNEQNGLEEERRLMYVAITRAKERLYLSHTQSRMLHGQVRYNMPSRFLEEL
PSDSLKWLTPKARDARWGGGNSRTGSTWQDGYTRQREYESNDFFDSGSERQRPAKRVGSA
SMEVKRLASPPRGNYPFTIGQNVFHTKFGEGRVTGLEGVDADARAQVNFKRHGIKWLQLS
IAKLAAID
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtactcagacttgctcgcgaacctcaatccagaacagcgcgaggcagtgaccctcccg
cccgtaaatgaaaatggccaagcccaatctgccttgattttggctggggcagggagcggt
aagacccgcgtactcaccacccgtatagcgtggttgattcagaccggccaggtatcccct
attggcgtcctagcggtgacctttaccaataaggctgccaaagagatgatgttgcgctta
agcgccatgttgccgattaatacccgtggcatgtggattggcacctttcacggcttatgt
aaccgattattgagggctcatcacaaagaagcgggtttgccatccacttttcagattctg
gatacccaggatcaactctctgcgattaagcgtcttttaaagggcttaaaagtcgatgat
gagaagtatcccgctaagcagctgcaatactttattgctcatgccaaagagcgcggtcaa
cgtgcaaaagatttatcagtaggcgatgactttcaagccaagatggcgcaactctatgct
gcttacgatgagcaatgccaacgtgaaggtgtagtggattttgctgaactcttattgcgt
agttatgaattgcttaaacatagtgaagctattcgtacgcattaccaagagcgcttccgt
catattctgattgatgagttccaagataccaatgccttgcaatatgcatggcttaaatta
ttgtcaggtcatgatactagccgcatcaatgtgagtggtatgggcagcagctccgtattt
gctgtaggtgatgatgatcaaagtatttatgctttccgcggcgcagatgtagaaaacatg
cgcctctacgaaaagcaataccacccgctcatggtgaagctagagcagaactatcgttca
cacggccatattctggatactgcaaatcatttgattgctaacaactcagagcgccttggt
aaaaacctacgcaccgatgctggtcatggcgagccggtccgaatttatgaggctcctagt
gatcatgccgaggctgcttggttggtagatgagatcaaggctttagtaaatagcggcatt
aaacgtactgaagtagctttgctctatcgtagtaacgctcagtcacgcatcattgagcac
gctttattttctgcgggcattccgtatcgtgtgtatggtggtttacgcttctttgagcgc
gctgaaattaaacatgcgcttgcctatctccgtttgcttgagaatccaaatgacgatacc
tctttctcacgagtggtgaatttcccaacccgtggaattggtgcgcgctcaattgaggca
ttgcaagatgctgccagagcgcagcaatgctccttgtacttagcagcctcctctctagaa
ggtaaggcgggtgcagcgcttggtggttttgtacgcttagtggatcacatgcgtgaagca
acgcgtcacaataccttgccagaaactgttgaatttgtgattcagcatagcggcttgatt
cagcactacctctcagagcgcgaaggccaagaccgtgtagaaaacttacaggaactgatc
aatgcagcaacggcatttattgccgaagaaggctatggccaagatgcggctgctgcaatg
ttgccaggtgagaatgctcctggtgttgtggaggtctctccactggctgcgttcctatcc
catgcctcattagaggctggggataaccaggctcaagcaggtcaggatgcagtccagctg
atgacagtgcattcggctaaaggcttagagttcacctctgtctttattaccggcctagaa
gagggtttatttccccacgagaacagcgtaaacgaacaaaatggcttagaggaagagcgt
cgcttgatgtatgtggcgattacccgtgccaaagagcgtctgtacttgtcacatacccaa
tcacgtatgttgcatgggcaggttcgctacaacatgccttctcgcttccttgaagagctt
ccttctgattcattgaagtggctcacccctaaggcaagagacgctcgctggggtggaggc
aattccagaactggatctacttggcaagatggatatacccgtcaacgcgaatacgaatcc
aatgacttctttgattctgggtctgaacgtcagagacctgctaagcgtgttggctctgct
tcaatggaagtgaaaagattggcctcacctccgcgtggaaattacccattcactatcgga
caaaatgtgttccacactaagtttggtgaggggcgtgttacgggcttagaaggtgttgat
gctgatgcaagagcgcaagtgaatttcaagcgtcatggcattaaatggctacagctaagt
attgcgaagcttgctgcgattgactga
DBGET
integrated database retrieval system
