Polynucleobacter sp. KF022: PKF022_16140
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Entry
PKF022_16140 CDS
T10441
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
polk Polynucleobacter sp. KF022
Pathway
polk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PKF022_16140 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
polk03019
]
PKF022_16140 (groL1)
03110 Chaperones and folding catalysts [BR:
polk03110
]
PKF022_16140 (groL1)
03029 Mitochondrial biogenesis [BR:
polk03029
]
PKF022_16140 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
polk04147
]
PKF022_16140 (groL1)
Enzymes [BR:
polk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PKF022_16140 (groL1)
Messenger RNA biogenesis [BR:
polk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PKF022_16140 (groL1)
Chaperones and folding catalysts [BR:
polk03110
]
Heat shock proteins
HSP60 / Chaperonin
PKF022_16140 (groL1)
Mitochondrial biogenesis [BR:
polk03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PKF022_16140 (groL1)
Exosome [BR:
polk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PKF022_16140 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
PKF022_16140 (groL1)
Exosomal proteins of breast cancer cells
PKF022_16140 (groL1)
Exosomal proteins of colorectal cancer cells
PKF022_16140 (groL1)
Exosomal proteins of bladder cancer cells
PKF022_16140 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BDT75949
LinkDB
All DBs
Position
complement(1618288..1619940)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVVFGDSARTKMVEGVNILANAVKTTLGPKGRNVVIERSFGGPTITKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTADIAGDGTTTATVLAQSIVREGMKYVVSGHNPMDLKRGI
DKAVTAAIEELAKISKPCTTTKEIAQVGSISANSDHSIGQRIAEAMEKVGKEGVITVEDG
KSLEDELEVVEGMQFDRGYLSPYFINQPEKQVAVLESPYVLLFDKKIANIRDLLPVLEQV
AKSGRPLLIIAEDVEGEALATLVVNNIRGIIKTCAVKAPGFGDRRKAMLEDIAILTGGTV
IAEEIGLTLEKTTLEHLGQAKRIEVGKENTIIIDGAGDAKAIEARVKNIRVQIEEATSDY
DKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVDDALHATRAAVEEGIVPGGGVALI
RAMQGIKGLKGDNADQDAGISIVLRAMQEPLRTIVSNAGEDAGVVVNAVQASKGNNGYNA
ATGEYGDLVAQGVIDPTKVTKTALVNAASVAGLLLTTDCAISEAPKDESAGGGMPDMGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgttgtatttggagatagcgcccgcaccaagatggtcgaaggcgta
aacattcttgctaatgcagtgaaaacaactttgggaccaaaaggtcgcaacgtggtgatt
gagcgttcattcggtggaccaacgattactaaagacggtgtatccgtagcaaaagaaatc
gaactcaaagacaagctccagaacatgggtgcgcagatggtaaaggaagttgcttctaaa
actgctgacatcgctggtgacggtacaactaccgctactgttttggctcagtccatcgtc
cgcgagggtatgaaatatgtagtttcaggtcataacccaatggacttaaagcgcggtatc
gataaggctgttacagctgcaatcgaagagctcgccaaaattagcaagccttgcacaacc
actaaagaaattgctcaagtaggttcaatctctgcaaatagtgaccacagtattggtcag
cgtattgctgaagcaatggaaaaagtaggtaaagaaggtgttattactgttgaagatggc
aagtctttggaagacgagctcgaagtagttgaaggtatgcagtttgaccgtggctatctt
tctccatacttcattaaccaaccagaaaaacaagttgccgtactggaaagcccatacgtt
ctcttgtttgataagaagatagccaacatccgtgatttgctcccagtgcttgagcaagta
gccaaatctggtcgtccattgttgatcattgcagaggatgttgaaggtgaagctttggca
actttggttgtgaacaacatccgcggcattatcaaaacctgtgctgttaaggctcctggt
ttcggtgatcgtcgtaaagcaatgttggaagacatcgcaattttgactggcggcacagtg
attgctgaagaaattggcctcacactcgagaaaacaactcttgagcacttgggtcaagct
aagcgtatcgaagtaggcaaagaaaacaccatcatcattgatggtgctggcgatgctaaa
gctattgaagctcgcgtgaagaacattcgtgttcagatcgaagaagctactagcgactac
gataaagaaaaattgcaagagcgtgtagctaagttggctggcggtgttgcagtgattcgt
gttggcgctgctactgaagtagaaatgaaagagaagaaagctcgtgttgacgacgcatta
catgcaactcgcgcagctgttgaagaaggtattgttcctggcggcggcgtagcattgatt
cgcgcaatgcaaggtatcaagggattgaaaggcgataacgctgatcaagacgctggtatc
agcatcgtattgcgtgctatgcaagagccattgcgtactattgttagcaacgccggtgaa
gacgcaggtgtggttgttaatgctgttcaggcaagtaaaggcaataatggctacaacgca
gctactggtgaatacggtgacctcgttgcacaaggcgttattgacccaaccaaggtaact
aaaactgcgttggtaaatgcagcttctgttgctggtctcttgttgaccactgattgcgcg
atttctgaagcgccaaaggatgagtctgctggtggcggcatgcctgatatgggcggcatg
ggtggtatgggtggcatgggcggcatgatgtaa
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