Polynucleobacter sp. KF022: PKF022_17170
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Entry
PKF022_17170 CDS
T10441
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
polk Polynucleobacter sp. KF022
Pathway
polk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PKF022_17170 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
polk03400
]
PKF022_17170 (mutM)
Enzymes [BR:
polk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PKF022_17170 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PKF022_17170 (mutM)
DNA repair and recombination proteins [BR:
polk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PKF022_17170 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
Motif
Other DBs
NCBI-ProteinID:
BDT76052
LinkDB
All DBs
Position
complement(1727720..1728556)
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AA seq
278 aa
AA seq
DB search
MPELPEVEVTRLGIAPHLEGRKVTAVKIIDGRLRWPVPTSLVKTLPGQKISNIERRGKYL
LLEMDTGYLLIHLGMTGTLRVLPSSESLKTHDRVTLEFGKLSLRLHDPRKFGAVLWHPKT
KGPIEKFTLLQKLGVEPFSEEFSGELGTEILYKASRKRSVAVKQFLLAGQAVVGVGNIYC
SESLFEAGIHPTKAAGKLTRPQCSRLAKAVRLILKKAIDAGGSSLKDFVNSDGDPGHFMV
QTKVYDRKGLPCKVCKTPISQIVQGQRSTYFCSQCQKR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttccagaagtagaagttacccgattaggaatcgcaccccaccttgagggt
cgcaaagtcaccgccgtcaaaattattgatgggcgcttgcgttggcccgtgcctaccagt
ctagtcaaaaccttgcctgggcaaaagatcagcaatatagagcggcgcggcaagtatctt
ttattggaaatggatacaggttacttactgattcatttaggcatgacgggaaccttgaga
gtgttaccaagttcagaatctctgaagacgcatgatcgcgtaacactggagtttggtaag
ttgagcttgcgtttgcatgatccccgaaaatttggggctgttttatggcacccaaaaact
aaaggccccattgaaaaatttacgcttttgcaaaagctgggcgttgagccattttctgaa
gagttttcaggtgaattgggtacggagattttgtataaagcatcgcgtaagcgtagcgtt
gcagtcaaacaatttcttttagcggggcaagctgttgttggtgttggtaatatttattgc
tctgaaagtttatttgaggccggcatacatcctactaaggcagcaggcaagctgactaga
ccgcaatgctctcgtcttgcaaaggccgtccgattaatactgaaaaaagccattgatgca
ggcggcagctcattaaaagattttgtcaatagtgatggtgatcccggacatttcatggtg
caaaccaaagtctatgatcgcaagggcttgccatgcaaggtatgcaaaacacccattagt
cagatagtgcagggtcagcgctcaacctacttttgttctcaatgtcaaaaacgctga
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