Polynucleobacter sp. KF022: PKF022_18250
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Entry
PKF022_18250 CDS
T10441
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
polk Polynucleobacter sp. KF022
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
polk03032
]
PKF022_18250 (hupB)
03036 Chromosome and associated proteins [BR:
polk03036
]
PKF022_18250 (hupB)
03400 DNA repair and recombination proteins [BR:
polk03400
]
PKF022_18250 (hupB)
DNA replication proteins [BR:
polk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PKF022_18250 (hupB)
Chromosome and associated proteins [BR:
polk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PKF022_18250 (hupB)
DNA repair and recombination proteins [BR:
polk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PKF022_18250 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Urease_beta
HU-CCDC81_bac_2
VWA_3
Motif
Other DBs
NCBI-ProteinID:
BDT76160
LinkDB
All DBs
Position
complement(1830165..1830485)
Genome browser
AA seq
106 aa
AA seq
DB search
MCADINIYKELHLNKAELIAAIADDAEISKAKAEFALNSAIDTIIKAVTKGDSVQLIGFG
TFASGKRAARMGRNPKTGEPLKIAAAKTVKFSAGKAFKDSVNKRKK
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgctgacatcaatatctataaggagcttcacttgaacaaagccgaactaatcgca
gcgattgctgacgacgcggagatttctaaagccaaagctgaattcgcattgaattctgct
atcgacacaatcatcaaagctgttactaaaggtgactcagtacaactgatcggctttggt
acatttgcttctggcaagcgtgctgcacgtatgggtcgtaacccaaaaactggcgagcca
ctcaaaatcgctgctgcaaaaactgttaagttttctgctggtaaagcgtttaaagattca
gttaacaagcgtaagaagtaa
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