Polynucleobacter sp. KF022: PKF022_18530
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Entry
PKF022_18530 CDS
T10441
Name
(GenBank) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
polk Polynucleobacter sp. KF022
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
polk03009
]
PKF022_18530
Enzymes [BR:
polk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
PKF022_18530
Ribosome biogenesis [BR:
polk03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PKF022_18530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
FtsJ
Motif
Other DBs
NCBI-ProteinID:
BDT76188
LinkDB
All DBs
Position
complement(1854212..1855528)
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AA seq
438 aa
AA seq
DB search
MTDQQKPRSLPLSEAITIAAQAISEVMSGRSLTEVLDQLEPHERPIVQSLSFDALRKWVR
SHELIKQFIPKTPPPETDHLLSVAIALFLHDGADSKGYPAHTIVDQAVKACSEYDKTMYA
KGLVNAVLRKVSLLVQPPEGEKRYPPDPIPMYVPAWWRANLKRNYSKSWQSILFRQAKRA
PLILRVNQRQYSREQYQSLLSEAGIASEPIEVVAGVALPCALLIPEAVPVSDLPGFYSGA
VSVQDAGAQLAAILLSPQDGEMVLDACAAPGGKTAHLLELADCSMQALELDGDRIGKIGG
NLDRLRLRSDKVRVVRGDASKAAWWDGIPFDKILLDAPCSASGIVSRHPDIPFLRREADI
RALQERQRGILNQAWKMLKPGGTLLYVTCSIFVEEGEDQANWFAGQHSDAVRLDAPGQIL
PGELNDGFYYALFKKNGP
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
ttgactgatcagcaaaaaccacgcagtctcccgctttctgaggcaattactatagctgca
caagcgattagtgaggtgatgagcggaagatcgcttacagaagttttagatcagcttgag
ccacacgaacgcccgattgttcagagccttagttttgatgccctccgcaaatgggtgcgc
tcgcacgagttgatcaagcaatttattccaaagacccccccgccagagaccgatcattta
ttgagcgttgccattgctttgtttttgcatgatggagcagatagcaaaggctatccagca
cacactattgttgatcaagcggttaaagcatgtagtgagtatgacaagaccatgtatgcc
aagggattggtaaacgcagttttgcgtaaggtaagtcttttagtgcagccgcccgagggc
gagaagcgctatccgccagatccaatcccaatgtacgtacccgcatggtggcgagcaaat
ctcaaacgcaattactctaaatcttggcaatcaattttgtttcggcaggctaagcgcgca
ccattaattttgcgtgtaaatcagcgtcaatattcgcgcgagcaatatcaatctctattg
tctgaggcaggaattgcatcagaacctatagaggtggtagctggcgttgcattgccttgc
gcactcttgattccagaagcggtacccgtgtctgatctgccaggtttttatagtggcgct
gtatccgtccaagatgcgggtgcacagcttgctgcgattttgttaagcccccaagatggt
gagatggtgttagatgcttgtgctgctcctggcggaaagacggcacacttactagagctt
gctgattgttcgatgcaggctttggagctagatggtgatcggatagggaaaattggtggc
aatttagatcgccttcgcttgcgctcagacaaggtgcgcgtagtgcgtggcgacgcttca
aaagccgcctggtgggacggcattccttttgacaaaattttgctcgatgcaccttgttct
gcatcgggtattgtgtcgcggcatccagacattccattcctgagacgtgaagcagatatc
cgggccttacaagaacgacagcgaggtattttgaaccaagcttggaagatgctgaagcca
gggggcactcttttgtatgtgacttgctcgatatttgttgaggagggcgaggatcaggct
aattggtttgcggggcagcactctgatgcggtacgattagatgctccaggccagattttg
cctggcgagttaaatgacggtttttactatgctttgtttaagaaaaatgggccatga
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