Polynucleobacter sp. KF022: PKF022_18580
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Entry
PKF022_18580 CDS
T10441
Symbol
topB
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
polk Polynucleobacter sp. KF022
Brite
KEGG Orthology (KO) [BR:
polk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
polk03032
]
PKF022_18580 (topB)
Enzymes [BR:
polk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PKF022_18580 (topB)
DNA replication proteins [BR:
polk03032
]
Prokaryotic type
DNA Topoisomerases
PKF022_18580 (topB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Zn_ribbon_PADR1
Cas12f1-like_TNB
HypA
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
BDT76193
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Position
1858891..1861569
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AA seq
892 aa
AA seq
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MATKATTKKSSSKTTAGDHPKALIIAEKPSVANDIAKALGGFTKYEDYFESDEFLISSAV
GHLLEIAAPEEFDVKRGKWSFANLPVVPPYFDLRPIAKTESRLKVLQKLIKRKDVNALIN
ACDAGREGELIFRLIAQHAKASQSIKRLWLQSMTPAAIRDGFANLRTDEDMQPLADAARC
RSEADWLVGINGTRAMTAFNSKSGGFFLTTVGRVQTPTLSIVVEREELIRKFISKDYWEV
KAEFIAAAGVYEGRWFDPKFKKDAAEPDARENRLWSEAAAQSIVAACRDKKANVTEEAKP
ATQLAPQLFDLTSLQREANARFGFSAKNTLGLAQALYERHKVLTYPRTDAKALPEDYLDT
VKQTMENLSEHSQDYRAFAKQILQGDPKDPKTKAGYGWIKPNKRIFDNSKISDHFAIIPT
LETPKSLSEPEAKLYDLVVRRFLAVFYPAAEFRVTTRITEASGHHFKTEGRVLVNPGWLT
VYGKSNQADDELVPVQEGESVQTESIAAVPLKTKPPARYTEATLLSAMESAGKWVDDDEM
REAMAEKGLGTPATRAAIIEGLLAEKYIVREARELIPTAKAFQLMTLLRGLDVEELTRPD
LTGSWENKLSLIEQGKMNRDTFMQEIAQMTQRIVKRAKEYDSDTIPGDYVTMTTPCPHCK
GPVKENYRRFACEKCGFTISKTPGGRAFEYPEVEELLREKTIGPLQGFRSKMGRPFAAII
KLSEIPEDDKDYPNAGFKLEFDFGNTQDDETEAVDFTGRQALGVCPKCSGAVYEDGMRYV
CENNTGPSKSCDFKTGKVVLQQEVSPEQVQKLLKEGKTDLLTNFKSNRTGRGFKAYLALD
SAGKIGFEFEAKAPKAEGAAKAPAKKRAGASAATKSAAKPKRASKAKSSSSS
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
gtggcaactaaagcaactaccaaaaaaagcagttcaaagactaccgcaggtgatcaccct
aaggcactcatcattgctgagaagccttctgttgccaatgacattgctaaggccctaggc
ggctttacaaaatatgaagactattttgaaagcgatgaatttctgatttcttctgcagtg
ggccatttattagagatcgctgctccagaagagtttgacgtaaagcgtggcaagtggtct
tttgccaatctgccagtggtgcctccatattttgatttgcgtccgattgccaaaacagag
tcacgcctaaaggttttacaaaagcttattaagcgcaaagatgtcaacgcacttattaat
gcatgcgatgctgggcgagaaggtgagttgattttccgtttgattgcgcaacatgcaaaa
gcatctcaatctattaaacgcctgtggctgcaatcgatgacaccggcagcaattcgtgat
ggttttgccaacttacgaactgatgaagatatgcagcctcttgcagatgcggcgcgttgt
cgctctgaagcagattggctagttggcatcaatggcactcgcgcaatgaccgcatttaat
agcaaaagtggtggattctttttaacaaccgtaggccgcgtacaaactccgacactctct
attgttgtcgagcgcgaagaactcatccgtaaatttatctccaaagactactgggaagtg
aaagcagaattcattgctgcagcaggcgtctatgagggtcgttggtttgatccgaagttt
aaaaaagatgctgccgaaccagatgctcgcgagaatcgcttatggagcgaagcagctgca
caaagcatcgtagcggcatgtcgtgacaaaaaagcaaacgtaactgaagaagccaagcca
gccacacagcttgcccctcagctattcgacttaactagtttgcagcgcgaagcgaatgcg
cgctttggcttctccgcaaaaaatacattaggtcttgcacaagccttatatgagcgtcac
aaagtattaacgtatccgcgtactgatgcaaaagcactgccagaagattatctcgatacg
gttaaacaaaccatggagaacctctctgagcattcgcaagactatcgtgcatttgccaaa
caaattctgcagggcgatcccaaggatccaaaaactaaggcgggctacggatggattaaa
ccgaacaagcgcattttcgataactccaaaatttccgatcactttgcgatcattcctact
ctagaaacaccgaagagcttgagtgagccagaggcaaaactttacgatttggtagtgcgt
cgcttcttggcggtgttttatcccgctgcagaattccgcgttactactcgtattacagag
gcctcaggacaccactttaaaactgaggggcgtgtgctcgtaaacccaggctggctaacg
gtctacggcaaatccaatcaggcggatgatgagctagttccggtccaagagggcgaatcc
gttcaaaccgaatccatcgctgcagtaccactaaaaacaaaaccaccagcacgctataca
gaagcaacattgctctccgcaatggaaagtgctggtaagtgggtagatgatgatgagatg
cgcgaagccatggctgaaaagggcttgggcacaccagcaacacgggcggcaattattgaa
gggctactggctgaaaaatatatcgtacgcgaagcgcgtgagctaataccaacagccaaa
gcatttcagctaatgactttattgcgcggtttagatgttgaagagctgactcgacctgat
ttgactggcagttgggagaacaaactttctctcatcgagcaaggcaagatgaatcgcgat
accttcatgcaagagatcgcgcaaatgactcagcgtattgtgaagcgcgctaaagaatac
gacagcgataccatccccggcgactatgtcacgatgaccacgccatgcccgcactgtaag
ggcccggtgaaagaaaactaccgtcgttttgcttgcgaaaagtgtggctttactatcagc
aaaacacccggtggacgtgcgtttgaatatcctgaagttgaggagttgctgcgtgaaaaa
accattggtccgctacaaggcttccgcagcaaaatgggaaggccatttgcagcaatcatt
aagttaagcgaaattccagaggacgacaaagactatccaaacgctggtttcaagctcgag
tttgattttggtaatacacaagatgacgaaactgaagcggttgatttcacaggccgccaa
gcattaggcgtttgtccgaaatgctctggtgctgtttatgaagatggcatgcgctacgtt
tgcgaaaacaatactggccctagtaaatcgtgtgatttcaaaaccggcaaggttgttttg
caacaagaagtttcgccagagcaagttcagaaattgttgaaagaaggcaaaacggatctt
ctaaccaactttaagtcgaaccggacagggcgtgggtttaaggcctatttagccttagat
tctgcgggcaaaattggttttgaatttgaagctaaagcccccaaagcggagggggccgct
aaagcccctgcgaagaaacgggcgggtgcaagtgcagcaactaaatcagctgcaaaacct
aagcgcgctagcaaagcaaagtcatcctctagcagctga
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