Pollutimonas sp. M17: OEG81_00485
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Entry
OEG81_00485 CDS
T09676
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
poll
Pollutimonas sp. M17
Pathway
poll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
poll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OEG81_00485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
poll03019
]
OEG81_00485
Enzymes [BR:
poll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OEG81_00485
Messenger RNA biogenesis [BR:
poll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OEG81_00485
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_25
UvrD-helicase
AAA_22
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
UYO93840
LinkDB
All DBs
Position
complement(113419..114825)
Genome browser
AA seq
468 aa
AA seq
DB search
MTTQTPFAALGLAEPLLRAVADTGYEHPTPIQAQAIPQVIKGGDLLAAAQTGTGKTAGFT
LPILHRLLQNPAQGRKPGQPRVLILTPTRELTAQVEESVRTYGQHTSVRSMVMFGGVNIN
PQINALRKPLDILVATPGRLLDHAQQKTVDLSGVEILVLDEADRMLDMGFIRDIRRILAL
LPKKRQNLLFSATFSDEIRELSKGVLTDPIEISVARRNTASELVAQSMVLTEQAHKRDLL
SYIIRESGWHQVLVFTRTKHGANRLAEKLVKDGLSAAAIHGNKSQAARTRALAGFKDGKV
AVLVATDIAARGIDIDHLPHVVNFELPNVPEDYVHRIGRTGRAGSTGSAMSLVDRSEIKL
LNAIEKLIKRPIERTTVNGWSPDMVKAEPAHARDHDDDRPPRRAGNAPRRTGAGAGARQA
PRAGGQPGESHRSGNGGRKPAGGGAGQPRQHGNPGRRNSGQRAALLGK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
ttgactacccaaacaccctttgccgcccttgggctggcagaaccccttttgcgtgccgtc
gccgacaccgggtacgagcaccccacccccatccaggcgcaggccattccgcaagtgatc
aagggcggcgacctgctggccgccgcacaaaccggcaccggtaaaacggccggtttcacg
ctgcccatcctgcaccgtttattgcaaaaccccgcccaaggccgcaagcccggccagccg
cgcgtgctgattctcacccccacccgcgaactgaccgcgcaggtcgaggaatcggtgcgc
acctatggccagcacacctcggtgcgctccatggtgatgttcggcggggtcaatatcaat
ccgcaaatcaatgcgctgcgcaagccgctggacatcctggtggccacgcccggccgcctg
ctggaccatgcgcaacagaaaaccgtggatctttccggcgtggaaatcctggtgttggac
gaagccgaccgcatgctggacatgggcttcatccgcgatatccgccgcattctggcgctg
ttgcccaagaagcgccagaacctgctgttctcggccaccttctcggacgaaatccgcgag
ctctccaagggcgtgctgaccgaccccatcgaaatctcggtggcccgccgcaatacggcc
tcggaactggtcgcccaaagcatggtgctgaccgaacaggcgcataagcgcgacctgctc
agctacatcatccgcgaaagcggatggcatcaggtgctggtgttcacccgcaccaagcac
ggggcgaaccgcctggccgaaaaactggtcaaggacggcttgtccgcggccgccatacac
ggcaacaagagccaggcggcgcggacccgcgccctggccggcttcaaggacggcaaggtc
gccgtgctggtcgccaccgacatcgcggcccgcggcatcgatatcgaccatctgccccac
gtcgtgaatttcgagctgcccaacgtgcctgaagactatgtgcaccgcatcggccgcacc
ggccgcgccggcagcaccggctcggccatgtcgctggtcgacaggtcggaaataaagctg
ctgaacgccatcgagaaactgatcaagcgccccatcgagcgcaccaccgtcaacggttgg
tcgcccgacatggtcaaggccgagccggcccatgcccgcgatcacgatgatgaccgtcct
ccacgccgtgcgggcaatgcgccccgcagaaccggcgcgggcgccggcgccaggcaggcc
cccagggccggcggccaacccggcgaatcgcaccgttcgggcaacggcggacgcaagccc
gccggcggcggcgcaggccagccccggcaacatggcaatccaggacggcgcaacagcggc
cagcgggccgcattgttgggcaaataa
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