Pollutimonas sp. M17: OEG81_08390
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Entry
OEG81_08390 CDS
T09676
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
poll
Pollutimonas sp. M17
Brite
KEGG Orthology (KO) [BR:
poll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
poll03009
]
OEG81_08390 (rlmD)
Enzymes [BR:
poll01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
OEG81_08390 (rlmD)
Ribosome biogenesis [BR:
poll03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OEG81_08390 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_25
Methyltransf_31
RrnaAD
MTS
Methyltransf_32
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_23
Methyltransf_11
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
UYO95296
LinkDB
All DBs
Position
1760760..1762073
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AA seq
437 aa
AA seq
DB search
MTLEVFDIESLDLEARGIARREGKVVFVDGALPGEKVLASISRQKATYDTARLERVLKPS
PQRTEPPCPYFGVCGGCAMQHLEPAAQVAVKQRVLEDALGHIGKVQPAMVLPPLHGPTFG
YRYRARLSVRHVAKKGGVLVGFRERRGSYVADIRECRVLPPHVSGMLLPLRELIGSLSRP
DRFPQIEVAVGDRTTALLLRHMEALTPSDVALLREFAARHDVTWWLQSKGPETVRPLDAE
DADKLAYALPEFGLRMPYRPTDFTQVNHAINRTLISKAIGLLDVQPEDRVADLFCGLGNF
TLPLATRAASAVGVEGSSALTERAMEAARRHGLEDKTRFATLNLFEVDVQWLRDLGRFDR
VLIDPPREGAESVARALAALAPAERPRRIVYVSCSPATLARDAGILVHEGGYSLQSAGVI
NMFPHTGHVESIAVFDA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttgaagtatttgatatagagtcgctcgaccttgaagcgcggggcattgcccgc
cgcgagggcaaggtcgtatttgtggacggcgcgctgccgggtgaaaaggtattggccagc
ataagccggcaaaaagccacctacgacacggccaggctggagcgggtgctcaagccctcg
ccgcagcgcacggaaccgccctgtccctatttcggggtctgcgggggctgcgccatgcag
catctggagccggccgcccaggtggcggtgaaacagcgcgtcctcgaggatgcgctgggg
catatcggcaaggtgcagcccgccatggtattgccgcccttgcacggccccactttcggc
tatcgctatcgcgcccgcctgtcggtccggcatgtggccaagaagggcggcgtcctggtg
ggctttcgcgagcgccgcggcagctacgtggccgacatcagggaatgcagggtcttgccg
ccgcatgtctctggcatgttgctgcctttgcgcgagttgatcggctcactgtcgcgcccc
gaccggtttccgcagattgaagtcgcggtcggagaccgcacaacagccttgctgctgcgc
cacatggaagcgctgacgccgtcggacgtcgccttgctgagggagttcgccgcccgccac
gacgtgacttggtggctgcagtccaaggggcctgaaacagtgcgtccgctggatgccgaa
gacgccgacaagctggcctatgccttgcccgagttcggcctgcgcatgccttaccgcccg
accgatttcacccaggtcaaccatgccatcaaccgcacgctgatatccaaggccatcggc
ctgctggatgtgcagcccgaggaccgggtcgccgacctgttttgcggattgggcaatttc
accttgcccctggctacccgcgcggccagtgcggtgggggtggaaggcagctcggccctg
acggaaagggccatggaagcggcccgccggcacggcctggaggacaagacccgttttgcg
accttgaatctgttcgaggtggacgtgcaatggctgcgggatctggggcgcttcgatcgc
gtgctgatcgatccgcctcgcgaaggcgccgaatcggtggcgcgggcgcttgcggcgctg
gcccccgcggaaaggccccggcgcatcgtctatgtgtcctgcagccccgccacgctggcg
cgcgatgcgggaatactggtgcacgagggcggctatagcttgcagagcgcgggagtgatc
aatatgttcccgcacaccggccatgtggaatcaatagccgtgttcgatgcctga
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