Pollutimonas sp. M17: OEG81_10660
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Entry
OEG81_10660 CDS
T09676
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
poll
Pollutimonas sp. M17
Pathway
poll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
poll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OEG81_10660 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poll03021
]
OEG81_10660 (rho)
03019 Messenger RNA biogenesis [BR:
poll03019
]
OEG81_10660 (rho)
Transcription machinery [BR:
poll03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
OEG81_10660 (rho)
Messenger RNA biogenesis [BR:
poll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OEG81_10660 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
S1CSD-TOTE-2
NACHT
Mor
Motif
Other DBs
NCBI-ProteinID:
UYO92383
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All DBs
Position
2244965..2246221
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AA seq
418 aa
AA seq
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MHLTELKTQHVSKLLEMAAELEIDNASRLRKQELMFAIMKKRAKQGEQIFGDGVLEVLPD
GFGFLRSPDTSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GMQPEAIKHRIMFENLTPLHPDEVMTLERDIKSEENTTGRILDIFAPMGKGQRALIVASP
KSGKTVMMQHMAHAISTNYPDAVMIVLLVDERPEEVTEMQRTVRGEVVASTFDEPATRHV
QVAEMVIEKAKRLVELKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNVEEGGSLTIIGTALVETGSRMDEVIYEEFKGTGNSEVHLERRLAEKRVYPAINL
NKSGTRREELLIKPELLQKVWVLRKFIHDMDEIEAMEFILDKIRATKTNSEFFDMMKK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcaccgaattaaaaacgcagcacgtctcgaagctgctggaaatggccgccgag
ctggaaatcgacaacgccagccgcctgcgcaaacaagaactcatgtttgccatcatgaag
aagcgggccaagcagggtgaacagattttcggcgacggcgtgctcgaagtcctgccggac
ggcttcggtttcctgcgctcgcccgatacctcgtacctggccagcaccgacgacatctat
atatccccttcccagatccggcgcttcaacctgcatacgggcgattccatcgaaggtgag
gtccgcacgcccaaggacggggaacgctacttcgccctggtcaaggtggacaaggtcaac
ggcatgcaacccgaggccatcaagcatcgcatcatgtttgagaacctcacgcccctgcac
ccggacgaagtgatgacgctggaacgcgacatcaaaagcgaagaaaacaccaccggccgc
atcctggacatcttcgcccccatgggcaagggccagcgcgcgctcatcgtcgccagcccc
aagtcgggcaagacggtgatgatgcagcacatggcgcatgccatcagcacgaactacccc
gacgccgtcatgatcgtcctgctggtcgacgagcgccccgaggaagtcaccgaaatgcag
cgcaccgtgcgcggcgaagtggtcgcatcgaccttcgacgaacccgccacgcgccacgtg
caagtggccgaaatggtcatcgaaaaggccaagcgcctggtcgagctcaaaaaagacgtc
gtcatcctgctggactccatcacccgactggcgcgcgcctacaacaccgtcgtgcccgcg
tcgggcaaggtgctgaccggcggcgtggacgccaatgcgctgcaacggcccaagcgcttc
ttcggcgcggcccgcaatgtcgaggaaggcggttcgctgaccatcatcggcacggcgttg
gtcgaaaccggcagccgcatggatgaagtcatctatgaagaattcaagggcacaggcaac
tccgaggttcacctggagcgccgcctggccgaaaaacgagtgtatccggccatcaacctg
aacaaatcgggcacgcgccgcgaagaattactcatcaagccagagcttctacaaaaggtc
tgggtgctgcgcaagttcatacacgatatggacgaaatcgaagcaatggagtttattttg
gacaagattcgcgcaaccaagacaaactccgaatttttcgacatgatgaaaaaataa
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