Polynucleobacter sp. SHI8: PSHI8_00330
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Entry
PSHI8_00330 CDS
T10387
Name
(GenBank) membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
poln Polynucleobacter sp. SHI8
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
poln02000
]
PSHI8_00330
Transporters [BR:
poln02000
]
Other transporters
Pores ion channels [TC:
1
]
PSHI8_00330
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
BDW12397
LinkDB
All DBs
Position
35240..35923
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AA seq
227 aa
AA seq
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MNNFGKFGTALALASFVVASQAAPIAYEVNKTPANDNWSGAANGYVWKNGTDELCWRDNF
WTPATANALCDGAPAPVAAQPVQQQVVQTRQPISGTFTLGADGAYTLGSAVITPKGKLIL
DAALAKLVSYDLDKLVISGYTDSQGKDSLNMPLSKNRAKSVNDYLASKGVPASKMSYDGY
GSTNYVVNPSTCNGMKVNGRPVSRTVCEAPNRRVEVKFSGFAKETAK
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaacaattttggcaaatttggcacggctttagcccttgcctcattcgtggtggcatct
caagctgctcccattgcatatgaagtgaataaaaccccagcaaacgataactggagcgga
gcagcaaatggttatgtttggaaaaatggaacagatgaactttgttggagagataacttt
tggacgcctgcaactgcaaatgctctttgtgatggcgcaccagccccagtagctgcccaa
cccgttcaacaacaagttgtgcagactagacagcctatttccggtacgtttactttaggt
gccgatggtgcctacacattaggttctgcagttattacaccaaaaggtaagttaatcctt
gacgctgctttagcaaaattagtaagttatgacttagacaagctagttattagcggttat
acagactcacaaggtaaggactcattaaatatgcctttgtctaaaaaccgcgccaaaagt
gtcaatgattacttagcctctaaaggtgtgccggcctcaaaaatgtcttatgatggatat
ggatcaacaaattatgtagttaatccatctacatgtaatggcatgaaggttaatggtcgc
ccagtttcacggacagtttgtgaagcgcctaaccgtcgtgtagaagtcaaatttagcggc
ttcgcaaaagaaacagctaaataa
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