Polynucleobacter sp. SHI8: PSHI8_02150
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Entry
PSHI8_02150 CDS
T10387
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
poln Polynucleobacter sp. SHI8
Pathway
poln02024
Quorum sensing
poln03060
Protein export
poln03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PSHI8_02150 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PSHI8_02150 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSHI8_02150 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
poln02044
]
PSHI8_02150 (ffh)
Enzymes [BR:
poln01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PSHI8_02150 (ffh)
Secretion system [BR:
poln02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PSHI8_02150 (ffh)
Eukaryotic Sec-SRP protein
PSHI8_02150 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_31
nSTAND3
AAA_24
AAA_19
AAA_33
YqeC
AAA_14
GTP_EFTU
AAA_30
T2SSE
AAA_16
Helicase_RecD
APS_kinase
DUF5131
Thymidylate_kin
Rad17
TsaE
ArsA_ATPase
DUF3515
Ribosomal_L36e
Spectrin_Dys-1
HTH_Crp_2
cobW
ResIII
DUF724
Motif
Other DBs
NCBI-ProteinID:
BDW12579
LinkDB
All DBs
Position
complement(208645..210039)
Genome browser
AA seq
464 aa
AA seq
DB search
MLENLTDRLSRVVKTIRGQARLTEENTAEMLREIRLALLEADVSLPVIKELLANIKEKAL
GEEVVSSLTPGQALVGIVRDELVKIMNGGASSDAISAGKLNLATQPPAVILMAGLQGAGK
TTTVAKLAKWLIRTQKKKVLTVSCDVYRPAAIEQLKTVTAQAGADWFESNVNQKPVDIAF
AAIDWAKRHYYDVLLVDTAGRLGIDAEMMAEIAALHAAVKPIETLFVVDAMLGQDAVNTA
KAFHATLPLTGVVLTKLDGDSRGGAALSVRQVTGVPLKFVGVSEKIDGLDAFDAERMAGR
ILGMGDILALVEEAQKNVDHKEAEKLVAKIKKGGFDLSDFRSQISQMRNMGGLANMMDKL
PAQMAQAAAKTDMNAAEKNIKRMQGIIDSMTPQERAKPELLKASRKRRIAQGAGVQVQEV
NRMLNQFEQMQTMMKQFSGGKMARMMGQMAAKGMGKGLGKGLFK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgctagaaaatctaacagaccgtttaagtcgtgtggtaaaaaccattcgtggccaagca
cgactgaccgaagaaaatacagcagaaatgctccgtgaaatccgcctagcccttttggag
gctgatgtttcattaccggtcattaaagagttattagccaatatcaaagaaaaagctctt
ggtgaagaagttgtttctagcttaacacctggacaggcattagtgggtattgttcgtgat
gaattggtaaaaatcatgaatggcggtgcatccagtgatgcaatctccgccgggaaactt
aatctagcgacccaaccacctgcagtcattttgatggcaggtctacaaggtgctggtaaa
acaactactgtcgcgaaattagccaaatggttaattcgcacgcaaaagaaaaaagtgctg
acggtttcttgtgacgtatatcgacccgcggcgattgaacagctcaaaacagttacagcc
caagcgggcgcagactggtttgagagcaatgtgaatcaaaagcccgttgatattgcattt
gctgctatcgattgggcaaaaagacattactatgatgttctccttgtagatacggctggt
cgtcttggtatcgatgctgaaatgatggcagaaatcgccgctctgcatgctgcagtcaaa
ccgattgaaactctttttgtggttgacgcgatgctcggtcaagatgctgtcaataccgct
aaggctttccacgccactttgccactcacgggtgttgttctgacaaagttagatggtgac
tctagaggtggtgcagccctttcagtaaggcaagtcacaggtgtgccactgaagtttgtg
ggtgtttcagaaaaaattgatggtttagatgccttcgatgctgaacggatggcaggtcgc
atcttaggtatgggagatatccttgcgttagtcgaagaggcgcaaaaaaatgtcgatcat
aaagaagctgaaaagttagtcgccaaaattaaaaaaggtggctttgacttatctgacttt
agaagtcagataagtcaaatgcgaaacatgggtggtctggccaacatgatggataaactt
cctgcgcaaatggctcaagccgctgcaaaaacggatatgaatgccgctgagaaaaatatc
aaacgaatgcaaggcatcattgacagtatgactcctcaggagcgcgcaaaacctgaatta
ttaaaagcgagtcgtaagcgccgtattgcccaaggggcaggtgtccaggtccaagaagta
aatcgtatgctcaaccagtttgaacaaatgcaaactatgatgaaacagtttagtggcggc
aaaatggcacgcatgatgggccaaatggccgcaaaaggtatgggtaaaggtttaggtaag
ggcctttttaagtga
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