Polynucleobacter sp. SHI8: PSHI8_02970
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Entry
PSHI8_02970 CDS
T10387
Name
(GenBank) hypothetical protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
poln Polynucleobacter sp. SHI8
Pathway
poln00540
Lipopolysaccharide biosynthesis
poln01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PSHI8_02970
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
poln01005
]
PSHI8_02970
Enzymes [BR:
poln01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
PSHI8_02970
Lipopolysaccharide biosynthesis proteins [BR:
poln01005
]
Core region
PSHI8_02970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
BDW12661
LinkDB
All DBs
Position
complement(290304..291656)
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AA seq
450 aa
AA seq
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MMLSKELFPNEPYDYFSRLTIVEKLALISVCLLPIFHLTFNDWTGYWIVLSSFFSLVAIS
QNPKSIKEVFSDSRSKWVILGLIAYILAIFMSQLCRWSFTHKAYLDTSPFLYFIPVFIFV
VWRKIDMGKWLQWVLPIIIIGAFWSTFYHHRELARPDWIQDRRFAPYFSDPLAFGQINLT
LGLMGLSTINFSGWTLKENMMKLWGLLGFSFGIYLSIRSGSRTGWLAIPIILIMIGCVKL
DWSRSKTLLFSFFTTAVIIVTIYVIFPSAQERIALAIHEIISYPWQGGIAPDTSVGLRIT
FQRLGFFYFSESPIYGWGTAGYTAIKDAIEVQNYSTEYARNFVYSALFHNEIMTQMVRYG
IFGIVGYILAVLVPLGLAFHSLKSKNGIVKRSALLCSIFLICQIVAGFSDEFINLKGMVA
FYAFMITALLGTCIAYSYNTKVAIQLNSCS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgatgttatcaaaagaactatttcctaatgagccttatgactatttttctaggttaact
atcgttgaaaaattagcactcatcagtgtttgtttattacctatatttcatcttacattt
aatgattggacaggatattggattgtcttaagctctttttttagtttggtagctatatct
caaaacccaaaatcgattaaagaagttttcagtgattccagatctaaatgggtaatacta
ggtttaatcgcctatatcttggcaattttcatgtcccaattatgcagatggtcatttacc
cataaggcatatttagacacgagtccatttttatatttcattccagtatttatctttgtt
gtttggagaaaaatagatatgggtaaatggcttcaatgggttcttccaataatcatcata
ggagcattttggtctaccttttatcaccatcgagaattagctagacctgattggattcag
gatcgaagatttgcaccctacttttcagaccctctagcatttggtcaaatcaacctcacc
ctcgggctcatgggtttatccaccatcaacttttcaggttggactctcaaagaaaatatg
atgaaattatggggcttacttggattctcattcggtatttatttatctattcgttctggg
tctagaacaggttggctagctattccaataatattgatcatgattggttgtgtaaaactt
gattggtcaagaagtaaaactcttctattttctttttttactactgctgtaattattgta
actatttatgttatttttccttcagcgcaagaaaggattgcattagcaattcatgaaatt
atttcttacccctggcagggtggtattgctcctgatacgtcggttggtttaagaattact
tttcaacgattaggttttttttatttttctgaaagtcccatttatggttggggaactgct
ggatatacagcgattaaagatgcgatcgaagtacaaaactattcgacagaatatgcaaga
aattttgtctatagcgcattattccataatgaaatcatgacccaaatggttagatatggc
atattcggtattgttggatatatcctagcagtattagttcctttgggcttggcattccat
agtctcaagtcaaaaaatggcattgttaaacgaagcgccttactttgttccatattttta
atttgtcagatagttgctggattttcagatgaatttatcaacctaaaaggaatggttgca
ttttatgcatttatgataacggcccttttaggtacttgtatagcttattcttataataca
aaagtagccatccaattaaactcttgcagttaa
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