Polynucleobacter sp. SHI8: PSHI8_03460
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Entry
PSHI8_03460 CDS
T10387
Symbol
xerD
Name
(GenBank) tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
poln Polynucleobacter sp. SHI8
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
poln03036
]
PSHI8_03460 (xerD)
Chromosome and associated proteins [BR:
poln03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PSHI8_03460 (xerD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Integrase_1
DUF3435
MrpR_N_CB
Phage_int_SAM_5
HBD
Motif
Other DBs
NCBI-ProteinID:
BDW12710
LinkDB
All DBs
Position
336334..337260
Genome browser
AA seq
308 aa
AA seq
DB search
MNKINEQSPILRQSTQYIGSFIDALWLEDGLSKNTLGAYRSDLEIFAQWLDQAYQKNILQ
STTVEITDFMAKRRADKATSANRRLTVLKRFFRYMIRQNLLEEDPCINIRPAKQAMRFPT
SLTESQIEALINAPNIEEDLGLRDRAMIELMYASGLRVSEIIQLKLIHLRLNEGIIHIVG
GKGNKERLVPFGGEAANWIGQYLEQARPTLLAHQTSEYLFIGRHTANCLTRQAFWYVIKR
YAVIAGIQGHLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHIARERLKNI
HQQHHPRG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaattaatgaacaatcgcctattttacggcaaagcacacaatacattggcagc
tttatagatgcactttggttggaagatggcttatcaaaaaacacacttggagcgtatcga
agtgatttagagatttttgcgcagtggcttgatcaggcatatcaaaaaaatatccttcaa
tctacgactgtagaaatcactgatttcatggcaaaaagaagagccgataaagccacatcc
gccaatcgacggttaactgttttaaaacgattttttcgttacatgattcggcaaaactta
ttggaagaagatccctgcatcaatataagacctgctaaacaagccatgagatttccgacg
agtttgaccgagtcccaaattgaagcattaatcaatgcgccaaatattgaagaggactta
gggctacgtgatcgagccatgattgagctgatgtacgcaagcggtttgagggtatctgaa
atcattcagctcaagctgattcatttacgtttgaatgaaggcattattcatattgttgga
ggtaaaggaaataaagaacgcttagtcccatttggcggtgaagcagccaattggataggg
cagtatttagagcaagcaagaccaacactgcttgctcatcaaacgagtgagtatttattt
attggtcgtcatacagcgaactgtttaacgcgccaggcattttggtatgtcatcaaacga
tatgccgtgattgcaggtatacaggggcatctttcgccacacaccttaagacatgccttt
gccacgcatttactcaatcatggcgctgacttacgcgtagttcaattattattagggcat
gcggatatatcgacgacacaaatttatacccacattgcaagagaacgtttaaaaaatatt
catcaacaacatcaccctagaggatga
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