Polynucleobacter sp. SHI8: PSHI8_05340
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Entry
PSHI8_05340 CDS
T10387
Symbol
msbA
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
poln Polynucleobacter sp. SHI8
Pathway
poln02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSHI8_05340 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
poln02000
]
PSHI8_05340 (msbA)
Enzymes [BR:
poln01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PSHI8_05340 (msbA)
Transporters [BR:
poln02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PSHI8_05340 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
RsgA_GTPase
AAA_22
AAA_33
AAA_30
AAA
AAA_29
AAA_25
DUF3584
AAA_28
TsaE
NB-ARC
MobB
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BDW12898
LinkDB
All DBs
Position
531158..532873
Genome browser
AA seq
571 aa
AA seq
DB search
MIILALLAMAVVAATETSIPALMKPLLDRGFTGGLNDKLWQIPLFLVGLAFIRGAAQFLS
NYWLNRVINEVLLILREQMFARLLHAPTEFFQQSTAANLINTVVFEVNNVLSILSSVAIN
LVRDSLTVLGLLGYLFYLNWKLTLVVMVIFPIIGYTISRINKRLRSLGRDQQKYTSELAY
VVEEASAGHKVVKLNSGQDYEMYRFTEMAKQLRKFAIRSSIAGGLNQPITQIVASIALSG
VLLIAILQSSTGGTTVGEFAAFVTAMMLIISPLKHLADINQPLQRGLIAAEMIFGLIDQP
LEKQVDEVHAKSLKTAKGNIEFDHVSFSYQAAHQESTDPQREVLRDIQLNIAPGEVVAFV
GPSGSGKTTLVNLVPRFYTPTTGRILLDGHPIEEYKLADLRLQIGFVSQDVILFNDTIAA
NVAYGVVHQEDIDRVKVAEAIAAANLSEMIRDLPDGIDTVIGDNGNRLSGGQRQRLAIAR
AVYKNAPILILDEATSALDSESERLVQEALEYLMQGRTTLVIAHRLSTIENADRIAVLEY
GRIVELGTHAELIERGGLYSSLHRLQFSAKA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgattatattggccttattggcaatggctgtagtagctgccactgaaacctcaattccc
gcattgatgaaacccttattagaccgcggttttacaggtggactaaacgataagttgtgg
caaattcctttgttcttggttggtcttgcctttattcggggggcggcacaatttttatct
aactattggttaaaccgggtcattaatgaagtcttattaattcttcgcgaacaaatgttt
gcgcgtctattgcatgctcctaccgaattttttcaacaaagtacggcggcaaacctaatc
aataccgttgtctttgaagtaaataacgtattgagtattttaagtagtgttgcgatcaat
ttagtcagagactcattaactgtattgggtttattaggctacttgttttatctcaattgg
aaattaacacttgttgtgatggtcatttttccaatcattggttacacgattagtcgaatc
aataagcgcttaagatccttaggtcgtgatcaacaaaaatatactagtgaattagcgtat
gtagttgaagaggcaagtgctggacataaagttgttaaattaaatagtgggcaggattat
gagatgtatcgttttacggaaatggccaaacagctcagaaaattcgccattcgttcctca
attgctggaggattaaatcaaccgattactcagattgtggcttccattgcattatccggg
gttttgttgattgcgatcttacaatcatccactggcggcacgactgttggtgagtttgct
gcttttgtcactgccatgatgctgattatttccccgcttaaacatttggcagatattaat
caaccactgcaaagaggcttaattgctgctgaaatgatttttggtttgattgatcagccc
ttagaaaaacaagtagacgaagtgcatgcaaaatctctaaaaacagctaaaggaaatatt
gagtttgatcatgtgagtttctcataccaagcagctcatcaagagtcgactgatcctcag
cgggaagttctacgtgatattcagttaaacattgcacctggcgaagtagttgcctttgtt
ggaccctctggcagcggtaaaacaacattagttaatttagtgccgagattttatacgcca
acgaccgggcgaatattgctcgacggtcatccaattgaagaatataagttagctgattta
cgcttgcaaatcggttttgtaagccaagacgtcattttatttaatgacactattgcagcc
aacgttgcgtatggtgttgtgcatcaagaggatatcgatagggtgaaggttgctgaagca
atagccgcggctaatttatctgaaatgattcgtgatttaccagatggtatcgataccgta
attggcgataacggtaatcgattatcaggtggtcaaagacagcgtttagcgattgccaga
gcagtttataaaaatgccccgattcttattctagatgaagctacttcggccctcgactct
gaatcagagcgcctcgtgcaagaagcgttggagtacttgatgcagggtagaacaacatta
gtgattgctcaccgcctatcaacgattgaaaatgcagaccgtattgccgttcttgagtat
ggacgaattgtcgagttaggaacgcatgctgagctgattgagcggggtggtctctactcc
agcttacatcgattacagttttcagctaaggcttag
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