Polynucleobacter sp. SHI8: PSHI8_06680
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Entry
PSHI8_06680 CDS
T10387
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
poln Polynucleobacter sp. SHI8
Pathway
poln03030
DNA replication
poln03430
Mismatch repair
poln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSHI8_06680 (dnaQ)
03430 Mismatch repair
PSHI8_06680 (dnaQ)
03440 Homologous recombination
PSHI8_06680 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poln03032
]
PSHI8_06680 (dnaQ)
03400 DNA repair and recombination proteins [BR:
poln03400
]
PSHI8_06680 (dnaQ)
Enzymes [BR:
poln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSHI8_06680 (dnaQ)
DNA replication proteins [BR:
poln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSHI8_06680 (dnaQ)
DNA repair and recombination proteins [BR:
poln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSHI8_06680 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BDW13032
LinkDB
All DBs
Position
complement(666983..667687)
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AA seq
234 aa
AA seq
DB search
MKITRQIILDTETTGLHPNNGDRLVEIGCIELINRRMTGNNLHFYINPERDMPEAAAAIH
GLRQDFLKDKPVFADVVSEIASFSKGAEVIIHNAAFDLGFLDMEFKRLGLDSFSSIVVGV
IDTLTDAQRMFPGKRNRLDDLCNRFGVKNDHRTLHGALLDAKLLTEVYLCMTRGQNDLMM
DSGVETSNHSSVELQLPSASDLIILKASSEEEMLHQQLMEDIAKKAKNPPTWLH
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaattacgcgtcaaattattttagataccgaaacaacaggtttgcacccgaataac
ggtgaccgcctagtcgaaataggctgtattgagcttatcaatcgcagaatgactggtaac
aatttacatttttatatcaatcctgaaagagatatgcctgaagcggctgcggcaatccac
ggtcttcgtcaagactttttaaaagataaaccagtttttgcagatgttgtctctgaaatt
gcctctttttctaaaggggctgaggtgattattcataatgccgcgtttgatttgggcttc
ttagatatggagtttaaacgtctaggtctggattcttttagttccatcgttgtcggtgtg
attgataccctgaccgacgcccaaaggatgtttcctggtaaaaggaatcgtcttgatgat
ttatgtaaccggtttggtgtaaaaaatgatcatcgcactctccacggggcccttctcgac
gcaaaactcttgaccgaggtctacttgtgcatgacgagaggtcaaaatgatttaatgatg
gattcaggggttgaaacatccaatcactctagcgtggaattgcagttaccttcggcgtct
gatttaattattctcaaagcctcttctgaggaagaaatgttgcatcaacaattaatggaa
gatattgccaaaaaggctaaaaatcctccgacttggttgcattag
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