Polynucleobacter sp. SHI8: PSHI8_08930
Help
Entry
PSHI8_08930 CDS
T10387
Symbol
kdsA1
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase 1
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
poln Polynucleobacter sp. SHI8
Pathway
poln00541
Biosynthesis of various nucleotide sugars
poln01100
Metabolic pathways
poln01250
Biosynthesis of nucleotide sugars
Module
poln_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PSHI8_08930 (kdsA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
poln01005
]
PSHI8_08930 (kdsA1)
Enzymes [BR:
poln01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
PSHI8_08930 (kdsA1)
Lipopolysaccharide biosynthesis proteins [BR:
poln01005
]
Lipid A
PSHI8_08930 (kdsA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
BDW13257
LinkDB
All DBs
Position
884196..885059
Genome browser
AA seq
287 aa
AA seq
DB search
MKLCGFPVGLDHPFFLIAGPCVIESEQMALDTAGALKEITTSLNIPFIYKSSFDKANRSS
GTSYRGLGMEKGLEILATVKKQLGVHVLTDIHAIDEIKPVCEVVDVIQTPAFLCRQTDFI
HACAQSGKPVNIKKGQFLAPGDMINVINKARAAAKEAGLDEDNFMACERGVSFGYNNLVS
DMRSLAIMRQTQAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAIAVGISGIFMETH
PDPANAMSDGPNAVPLHKMKELLESLKGIDQLVKAPGQFSEDHFELN
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaactttgtggatttccagttggattagatcaccccttttttttaattgccggacct
tgtgtgattgaatctgagcagatggcacttgataccgcaggtgctttaaaagaaatcaca
actagcctcaatattccatttatttataaatcatcctttgataaagccaaccgttcatca
ggcacttcttatcgtggcttggggatggaaaaaggtttagagattttggcaacagtcaaa
aaacaattaggcgtgcatgtgttgacggatattcatgccattgatgagattaaacccgtt
tgtgaagtcgtggacgtcattcaaacgcctgcatttttatgtcgtcaaacggactttatt
catgcgtgtgcccagagtggtaaaccggtcaatattaaaaaaggtcagtttttagctcct
ggcgatatgatcaatgtgattaataaagccagagccgcagcaaaagaagctggccttgat
gaagataattttatggcttgtgagcgtggcgtaagctttggatataacaatttagtttcc
gatatgagaagtttggcgattatgcgtcaaacccaggcccctgtggtttttgatgccacg
cattccgtgcagctccctggtgggcagggcacaagtagtggtggtcagcgtgaatttgtg
ccggttcttgcaagagctgcgattgcagttggaattagtggtatttttatggaaacccat
ccagacccagccaatgccatgtcggacggcccgaatgctgtgcccctgcataaaatgaaa
gaattacttgagtctttaaaagggattgatcaactcgtcaaagcgcctggtcaattttca
gaagatcattttgaattaaattaa
DBGET
integrated database retrieval system
