Polynucleobacter sp. SHI8: PSHI8_10900
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Entry
PSHI8_10900 CDS
T10387
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
poln Polynucleobacter sp. SHI8
Pathway
poln00730
Thiamine metabolism
poln01100
Metabolic pathways
poln01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PSHI8_10900 (thiC)
Enzymes [BR:
poln01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PSHI8_10900 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BDW13454
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Position
complement(1100048..1101919)
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AA seq
623 aa
AA seq
DB search
MNKPQELTLGSLEQDLGQKFAYPASTKRYLTGSRPDILAPYRVIEQTATKTSTGELLENP
PIPVYDTSGPYSDPEVVINLEEGLPVPRKPWIIDRNDTVELAGPTSIYGIARAQDAKTKH
LRFSHIAPPRVAKEGHNVSQMHYAKKGIITPEMEYVALRESLNLASLRKDPRYQQILKQH
PGHSYGANLPEEVTAEFVRQEIAAGRAIIPANINHPELEPMIIGRNFRVKINGNLGNSAV
TSSINEEVEKMIWSIRWGADTIMDLSTGDNIHETREWIIRNSPVPIGTVPIYQALDKVGG
VAEDLTWEIFKDTLIEQAEQGVDYFTIHAGVLLRYVPLTADRITGIVSRGGSIMAKWCLA
HHKENFLYTHFNEICEIMNAYDVSFSLGDGLRPGCIADSNDAAQFGELRTLGELTQIAWQ
HDVQVMIEGPGHVPMQRIEENMHEELKHCLEAPFYTLGPLITDIAPGYDHITSGIGAAQI
GWYGTAMLCYVTPKEHLGLPNKEDVRVGIITYKIAAHGADLAKGMPGAQLRDNALSKSRF
EFRWEDQFNLGLDPERAREYHDATLPADGAKIAHFCSMCGPKFCSMKITQEVRDYAANQG
NNPQEGMQEKSIEFRKKGSQIYQ
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaccccaagaacttactttaggtagcctagaacaagacctcggtcaaaagttc
gcctatccagcatctactaaaagatacctcactggctctcgcccagatattttggcaccg
tatcgtgtgattgaacaaactgctaccaaaacttcaacaggggaattactagaaaacccc
ccgattcctgtctatgacacttcaggcccttacagtgatcccgaggtagtcattaattta
gaagaaggtttaccagttccaagaaaaccttggattattgatcgaaatgatacggttgaa
ctcgcaggcccaacttccatatacggaatagcgcgtgctcaagatgccaaaacgaaacat
ttacgtttttcgcacatagcccctcctcgcgttgcgaaggaaggtcacaatgtgagtcaa
atgcattacgcaaaaaaaggcattattactcctgaaatggaatacgttgccctgcgggaa
tctttaaatctggctagtctgcgcaaagatcctcgttatcaacaaatcctcaaacaacat
cctggtcattcctatggagccaatcttcctgaagaggttactgcagagtttgtgcgtcaa
gaaattgctgctggacgcgctattatcccggccaatatcaatcatcccgaattagagcca
atgattatcggtcgtaacttccgtgtcaaaatcaatggcaacttaggtaattccgctgtc
acgtcttccatcaatgaagaagttgaaaaaatgatttggtcgattcgttggggcgcagat
acgatcatggatttatctactggcgataacattcatgaaacccgtgaatggataattcgt
aactcccccgttccgattggtacggtaccgatttatcaagctttagataaagtgggtggt
gttgctgaggatctcacttgggaaattttcaaagatacgctgattgaacaggctgagcaa
ggtgtcgactactttacgatccatgcgggtgttttactccgttatgtcccgctaacagca
gaccgcataacaggtatcgtttctcgtggtggatcaattatggctaagtggtgtcttgca
catcacaaagaaaacttcctctacacacacttcaatgaaatctgtgaaatcatgaatgcc
tatgacgtttcatttagtcttggcgatggacttcgccctggttgtattgctgactcaaat
gacgcagcccaatttggtgaacttcgcacacttggcgaactaacgcaaattgcttggcag
catgacgtacaagtcatgattgaaggtcctggtcatgtgccaatgcaacgcatcgaagaa
aacatgcatgaagaactcaagcattgtttagaagctcccttttatacgcttggccctctt
attactgatatcgctcctggctatgatcacattaccagtggcattggcgctgcacagatt
ggttggtacggtactgccatgttatgttatgtcacgcctaaagagcaccttggtttacca
aacaaagaagatgttcgtgtgggaatcattacctacaaaattgccgctcatggtgcagac
cttgctaaaggtatgcccggtgctcagttacgggataatgccctttccaaatcgcgcttc
gagttccgctgggaagatcaatttaatcttggattagaccctgaacgtgcgcgggaatat
catgatgcaactctgcccgctgatggcgcaaaaattgctcacttctgctcgatgtgtggt
cctaaattttgctcaatgaaaatcactcaagaggtacgtgattacgctgctaatcaggga
aataatcctcaagagggtatgcaagagaaatcgattgaattccgtaaaaaaggttcacaa
atttatcaataa
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