Polynucleobacter sp. SHI8: PSHI8_11590
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Entry
PSHI8_11590 CDS
T10387
Symbol
dadB
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
poln Polynucleobacter sp. SHI8
Pathway
poln00470
D-Amino acid metabolism
poln01100
Metabolic pathways
poln01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSHI8_11590 (dadB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PSHI8_11590 (dadB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
poln01011
]
PSHI8_11590 (dadB)
Enzymes [BR:
poln01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
PSHI8_11590 (dadB)
Peptidoglycan biosynthesis and degradation proteins [BR:
poln01011
]
Precursor biosynthesis
Racemase
PSHI8_11590 (dadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Peptidase_M41
Motif
Other DBs
NCBI-ProteinID:
BDW13523
LinkDB
All DBs
Position
1177302..1178429
Genome browser
AA seq
375 aa
AA seq
DB search
MKHRPTKASILTQNLSHNLLKVKKMTNSAPTWAVVKANAYGHGLKPALKAFQNSEGIALL
DMEHAALARECGWQGRILLLEGIFTEGDLDDALNLSCEIVIHHEQQVTWLIQWFGRQSSG
NVTQFLANCPLWLKLNSGMNRLGFKSAQYGVSYEILKQMGCTVHHLTHFANADDPQVSPS
VKDQWEIFSKATQYVDGLKSAANSAAIIGHSFTHADMTRPGIMLYGASPSGKYEDIANLG
LKAGMNLRSEIIAFQELQAGDTVGYGSQYQAKKNTKIAVIACGYADGYPRSAPNGTPVWI
GKSENMMDGQIVPLVGRVSMDMMMVDVTNIAHAQIGSPIELWGELNPIDDVAFPAKTVGY
ELMCGLANRVRQEIL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatcgaccaactaaagcatcgattttgacacagaatctaagtcataacctttta
aaggttaaaaaaatgaccaattcggcaccaacatgggcagtggttaaagcaaatgcttat
ggacatggtttaaagcctgcgctcaaagcctttcaaaatagtgaggggattgccctttta
gatatggagcacgctgcactggcacgggaatgtggttggcaaggccggattttattattg
gaaggtatctttactgagggcgatctggatgacgccttgaatctatcttgtgaaatagtg
attcatcatgaacagcaagttacttggttaatccaatggtttggaagacagagttcagga
aatgtaactcagtttttggccaattgtcccctatggcttaagctgaattcaggcatgaat
cgattgggttttaaatctgcccaatacggtgttagttatgaaatcttgaagcagatgggg
tgtacggtccatcatctaacacattttgcaaatgcagacgatcctcaagtttcgccatct
gtaaaagatcaatgggaaatttttagtaaagcaacacagtatgtcgacggtttaaagagt
gccgcaaattctgctgcaatcattggacattcctttactcatgctgacatgacgcgtcca
ggaattatgttgtatggtgcatcaccttcaggaaagtatgaagatattgcgaatttagga
ttaaaggctggaatgaatttacgctcggaaataatagccttccaagaacttcaggcgggg
gacaccgtcggctatgggagtcagtatcaggccaagaaaaataccaagattgccgtcatt
gcatgtggttatgcggatggttatccgaggagtgcgcctaatggaactccggtttggatt
gggaaatcagaaaatatgatggatggccaaattgttcctttagttggtagagtttctatg
gatatgatgatggtagatgttacaaacattgcccacgcacagattggttcgccaatagag
ttatggggagaacttaaccctattgatgatgtggcatttccagcaaaaacagtcggttat
gaattaatgtgtggtcttgctaaccgggtcaggcaagaaattctttaa
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